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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57080 Canola cytosol 73.27 86.52
Bra019781.1-P Field mustard cytosol 72.97 84.67
CDX98047 Canola cytosol 72.67 84.32
AT1G63090.1 Thale cress cytosol 64.86 74.74
KRH03980 Soybean cytosol, plastid 55.56 64.69
HORVU1Hr1G048690.1 Barley peroxisome 32.43 63.53
PGSC0003DMT400058590 Potato plastid 53.15 61.25
Solyc08g080360.2.1 Tomato plastid 52.85 60.9
VIT_02s0025g04380.t01 Wine grape cytosol 56.16 60.52
HORVU2Hr1G094960.4 Barley cytosol 35.44 59.6
Solyc12g056410.1.1 Tomato cytosol, plastid 51.65 59.52
PGSC0003DMT400010881 Potato plastid 51.35 59.17
AT3G61060.2 Thale cress cytosol 50.15 57.39
GSMUA_Achr4P27200_001 Banana cytosol 47.45 55.05
KRH57251 Soybean plastid 55.86 54.55
GSMUA_Achr1P03900_001 Banana cytosol 47.75 54.45
GSMUA_Achr5P03300_001 Banana cytosol 47.45 54.3
GSMUA_Achr4P24870_001 Banana cytosol 49.25 54.13
GSMUA_Achr11P... Banana cytosol 46.25 53.85
Os09t0525300-01 Rice cytosol 45.35 53.74
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 48.35 53.67
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 48.65 53.64
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 48.05 53.33
TraesCS2D01G397700.1 Wheat cytosol 47.45 53.02
TraesCS1A01G188700.1 Wheat plasma membrane 48.35 52.96
TraesCS5B01G313700.1 Wheat cytosol 45.65 52.78
Zm00001d029673_P001 Maize plasma membrane 46.85 52.7
TraesCS2A01G400100.1 Wheat cytosol 47.15 52.68
TraesCS5A01G312700.1 Wheat cytosol 45.35 52.61
TraesCS5D01G319500.1 Wheat cytosol 45.35 52.61
EER99217 Sorghum cytosol 47.15 52.51
Zm00001d021224_P001 Maize cytosol 46.55 52.36
Os03t0116700-01 Rice cytosol, extracellular 46.55 52.19
GSMUA_Achr7P05860_001 Banana cytosol 45.35 52.07
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 47.45 51.97
HORVU5Hr1G080530.1 Barley cytosol 44.74 51.92
Os02t0675800-01 Rice cytosol 46.25 51.85
EER94629 Sorghum plasma membrane 46.85 51.83
GSMUA_Achr3P12400_001 Banana cytosol 44.74 51.74
TraesCS2B01G418200.2 Wheat cytosol 46.85 51.49
EER95641 Sorghum cytosol 45.05 51.02
TraesCS6D01G237300.1 Wheat cytosol 45.65 51.01
TraesCS6B01G269300.1 Wheat cytosol 45.65 51.01
TraesCS6A01G256100.1 Wheat cytosol 45.65 51.01
AT3G53000.1 Thale cress cytosol 45.95 51.0
KXG31015 Sorghum cytosol 45.95 50.83
Zm00001d027361_P001 Maize cytosol 45.05 50.34
Zm00001d051447_P002 Maize cytosol 43.54 48.99
EES11284 Sorghum cytosol 45.95 48.88
TraesCS4B01G356300.1 Wheat cytosol 45.05 48.86
TraesCS5A01G525700.1 Wheat cytosol 44.44 48.37
TraesCS4D01G350000.1 Wheat cytosol 44.44 48.21
GSMUA_Achr11P... Banana cytosol 26.13 48.07
AT5G52120.1 Thale cress cytosol 41.74 47.77
Zm00001d026078_P001 Maize cytosol 38.74 44.64
Os10t0522400-01 Rice cytosol 21.92 44.24
HORVU4Hr1G086110.1 Barley cytosol 19.52 42.76
Zm00001d024256_P001 Maize cytosol, mitochondrion 30.33 40.56
Zm00001d035636_P001 Maize plastid 29.43 37.55
Zm00001d021854_P001 Maize cytosol 9.61 36.36
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 25.83 36.29
HORVU5Hr1G055050.1 Barley mitochondrion 16.82 32.94
HORVU2Hr1G049730.1 Barley cytosol 16.82 32.94
AT2G02360.1 Thale cress nucleus 20.72 25.37
AT1G56240.1 Thale cress cytosol 19.82 23.24
AT1G09155.1 Thale cress cytosol 20.12 23.18
AT2G02240.1 Thale cress cytosol 22.22 23.12
AT1G80110.1 Thale cress cytosol 17.72 22.96
AT2G02300.1 Thale cress cytosol 19.52 22.89
AT1G56250.1 Thale cress cytosol 19.22 22.7
AT2G02340.1 Thale cress cytosol 20.72 22.62
AT5G24560.1 Thale cress cytosol 12.61 21.54
AT2G02250.1 Thale cress cytosol 19.52 20.97
AT2G02310.1 Thale cress cytosol 19.22 20.85
AT2G02350.2 Thale cress cytosol, mitochondrion 16.82 19.05
AT2G02320.1 Thale cress mitochondrion 16.82 18.24
AT2G02230.1 Thale cress cytosol 18.32 18.15
Protein Annotations
MapMan:35.1EntrezGene:837826UniProt:A0A1P8ATV4ProteinID:ANM60060.1ArrayExpress:AT1G12710EnsemblPlantsGene:AT1G12710
RefSeq:AT1G12710TAIR:AT1G12710RefSeq:AT1G12710-TAIR-GEnsemblPlants:AT1G12710.2Unigene:At.42062Symbol:AtPP2-A12
InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001810
RefSeq:NP_001322372.1PFAM:PF14299InterPro:PP2-likePANTHER:PTHR31960PANTHER:PTHR31960:SF2SMART:SM00256
SUPFAM:SSF81383UniParc:UPI000848ED4BSEG:seg:::
Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
Coordinates
chr1:-:4326739..4328546
Molecular Weight (calculated)
38005.3 Da
IEP (calculated)
7.774
GRAVY (calculated)
-0.215
Length
333 amino acids
Sequence
(BLAST)
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFELFGDLSL LPCVRLLCTI RYLSCSYQSL DTCYGLTFIG ACRFSSVAYL
201: QQIWWFEVDG EIDFPFPVGT YSIFFRLQLG RSGKWFGRRV CNTEQVHGWD IKPVRFQLWT EDGQYSSSQC MLTERGNWIH YHAGDVVVRE SNRSSTKIKF
301: SMTQIDCTHT KGGLSLDSVV VYPSSCKDQL KRF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.