Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 2
- golgi 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88110 | Canola | cytosol | 45.64 | 72.95 |
| AT2G02360.1 | Thale cress | nucleus | 45.13 | 32.35 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 44.62 | 31.41 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 45.64 | 31.01 |
| AT1G80110.1 | Thale cress | cytosol | 40.51 | 30.74 |
| KRG92586 | Soybean | cytosol, plastid | 47.69 | 30.69 |
| Solyc04g050990.2.1 | Tomato | cytosol | 45.64 | 29.97 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 46.67 | 29.74 |
| PGSC0003DMT400031292 | Potato | cytosol | 44.62 | 29.29 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 42.56 | 28.23 |
| PGSC0003DMT400060018 | Potato | cytosol | 45.13 | 28.11 |
| Solyc05g055870.2.1 | Tomato | cytosol | 44.1 | 27.92 |
| KRH68844 | Soybean | cytosol | 45.13 | 27.76 |
| AT2G02240.1 | Thale cress | cytosol | 44.62 | 27.19 |
| AT1G09155.1 | Thale cress | cytosol | 40.0 | 26.99 |
| AT2G02300.1 | Thale cress | cytosol | 38.46 | 26.41 |
| AT1G56250.1 | Thale cress | cytosol | 37.95 | 26.24 |
| AT2G02340.1 | Thale cress | cytosol | 41.03 | 26.23 |
| AT2G02250.1 | Thale cress | cytosol | 41.54 | 26.13 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 46.67 | 26.07 |
| AT2G02320.1 | Thale cress | mitochondrion | 41.03 | 26.06 |
| AT2G02230.1 | Thale cress | cytosol | 44.1 | 25.6 |
| AT1G56240.1 | Thale cress | cytosol | 36.92 | 25.35 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 43.08 | 24.93 |
| AT2G02310.1 | Thale cress | cytosol | 37.95 | 24.1 |
| AT3G53000.1 | Thale cress | cytosol | 26.15 | 17.0 |
| AT3G61060.2 | Thale cress | cytosol | 24.1 | 16.15 |
| AT1G63090.1 | Thale cress | cytosol | 22.56 | 15.22 |
| AT5G52120.1 | Thale cress | cytosol | 22.56 | 15.12 |
| AT1G12710.2 | Thale cress | cytosol | 21.54 | 12.61 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:832527 | UniProt:A0A2H1ZE72 | ProteinID:AED93325.2 | ArrayExpress:AT5G24560 |
| EnsemblPlantsGene:AT5G24560 | RefSeq:AT5G24560 | TAIR:AT5G24560 | RefSeq:AT5G24560-TAIR-G | EnsemblPlants:AT5G24560.1 | TAIR:AT5G24560.1 |
| Symbol:AtPP2-B12 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0030246 | InterPro:IPR001810 | RefSeq:NP_001318638.1 | PFAM:PF00646 | PFAM:PF14299 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2-like |
| PFscan:PS50181 | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI000848741C |
Description
AtPP2-B12phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]
Coordinates
chr5:+:8402205..8403486
Molecular Weight (calculated)
22786.2 Da
IEP (calculated)
4.305
GRAVY (calculated)
-0.193
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFLDLPEEC IATMISFTSP FDACRISAVS KLLRSAADSN TTWERFLPSD YRMYIDNSLS RFSNKQLFLR FCESPLLIED GRTSFWMEKR SGKKCWMLSA
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.