Factsheet for GSMUA_Achr9P02770_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P03670_001	Banana	nucleus	58.6	58.39
GSMUA_Achr6P36620_001	Banana	cytosol	44.91	49.42
GSMUA_Achr1P20450_001	Banana	plastid	43.86	48.45
GSMUA_Achr1P05750_001	Banana	cytosol	43.86	45.29
GSMUA_Achr1P05730_001	Banana	cytosol	41.4	44.19
GSMUA_Achr1P05720_001	Banana	cytosol	41.75	42.35
AT1G80110.1	Thale cress	cytosol	36.84	40.86
GSMUA_Achr5P10170_001	Banana	cytosol	22.46	40.0
VIT_14s0060g01990.t01	Wine grape	cytosol	38.6	39.71
Bra035198.1-P	Field mustard	cytosol	35.44	39.45
CDX87293	Canola	cytosol	35.44	39.45
CDY39994	Canola	cytosol	35.44	39.45
PGSC0003DMT400063740	Potato	cytosol	37.89	37.63
VIT_14s0060g02020.t01	Wine grape	cytosol	37.54	37.54
VIT_14s0060g02000.t01	Wine grape	cytosol	37.54	37.15
KRH33867	Soybean	cytosol	33.68	36.36
Solyc01g099990.2.1	Tomato	cytosol	36.84	36.21
Solyc01g100000.2.1	Tomato	cytosol	33.68	35.42
KRG96762	Soybean	cytosol	34.04	33.8
KRH68480	Soybean	cytosol	34.04	33.8
PGSC0003DMT400063744	Potato	cytosol	33.33	33.69
Solyc01g100010.2.1	Tomato	cytosol	32.28	33.09
KRH68481	Soybean	cytosol	18.25	32.91
GSMUA_Achr11P...	Banana	cytosol	16.84	26.52
GSMUA_Achr4P27200_001	Banana	cytosol	24.21	24.04
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	24.91	23.99
GSMUA_Achr5P03300_001	Banana	cytosol	22.81	22.34
GSMUA_Achr1P03900_001	Banana	cytosol	22.81	22.26
GSMUA_Achr7P05860_001	Banana	cytosol	21.75	21.38
GSMUA_Achr11P...	Banana	cytosol	21.4	21.33
GSMUA_Achr4P24870_001	Banana	cytosol	22.46	21.12
GSMUA_Achr3P12400_001	Banana	cytosol	21.05	20.83

Protein Annotations

EnsemblPlants:GSMUA_Achr9P02770_001	EnsemblPlants:GSMUA_Achr9T02770_001	EnsemblPlantsGene:GSMUA_Achr9G02770_001	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278
PANTHER:PTHR32278:SF2	PFAM:PF12937	PFAM:PF14299	SEG:seg	SUPFAM:SSF81383	UniParc:UPI000296CD28
UniProt:M0TWY6	MapMan:35.1	:	:	:	:

Description

Putative F-box protein PP2-B11 [Source:GMGC_GENE;Acc:GSMUA_Achr9G02770_001]

Coordinates

chr9:+:1967907..1969782

Molecular Weight (calculated)

32773.7 Da

IEP (calculated)

5.903

GRAVY (calculated)

-0.549

Length

285 amino acids

Sequence
(BLAST)

001: MEKKRARRVE KEEEEERERG NEFAKLPKEC ILHVFSFATP RDSCRSAVVS KAFLSCTGTD ALWERFLPSD YAEILSRAVN PVSSPSSKKE LYFGLCKPIL
101: IDGRKLSFHL ERSTGRKCYM VSSSIMYMAW RHVWRHWRWI SHSDSRFGEV AELVSVCWLE ITGSINSGLL SKKTLYTAYM VFKLASGAYG LNSPPQKVSV
201: SLGTYSSDSF ITLQQDDDDD DDDQEEEDEK GKRKLRDDGW MEIELGDFYN DEGDKGEVRI HLSQCEALHF KHGLLIEGLE FRPKI

Best Arabidopsis Sequence Match ( AT1G80110.1 )
(BLAST)

001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP

Arabidopsis Description

PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.