Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037582.1-P | Field mustard | cytosol | 26.99 | 58.67 |
| CDX95523 | Canola | cytosol | 28.22 | 58.23 |
| KRH42448 | Soybean | mitochondrion, plastid | 77.3 | 43.0 |
| KRH58553 | Soybean | plastid | 72.39 | 40.97 |
| AT3G18420.1 | Thale cress | plastid | 57.67 | 29.75 |
| VIT_01s0010g01810.t01 | Wine grape | plastid | 55.83 | 29.17 |
| PGSC0003DMT400086906 | Potato | plastid | 55.83 | 28.44 |
| Solyc01g008160.2.1 | Tomato | plastid | 55.83 | 28.44 |
| KRH57052 | Soybean | cytosol | 26.38 | 19.63 |
| KRH64138 | Soybean | plastid | 31.9 | 14.61 |
| KRG95856 | Soybean | plastid | 31.29 | 14.53 |
| KRH67571 | Soybean | plastid | 28.83 | 14.33 |
| KRH19745 | Soybean | plastid | 28.22 | 13.98 |
| KRH53808 | Soybean | plastid | 30.06 | 13.76 |
| CDY53406 | Canola | plasma membrane | 2.45 | 1.75 |
Protein Annotations
| EMBL:ACUP02009980 | EnsemblPlants:KRH07405 | EnsemblPlantsGene:GLYMA_16G086300 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | ncoils:Coil |
| PANTHER:PTHR26312 | PANTHER:PTHR26312:SF70 | PFscan:PS50293 | ProteinID:KRH07405 | ProteinID:KRH07405.1 | SUPFAM:SSF48452 |
| UniParc:UPI00029632B7 | UniProt:K7MG03 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:10483800..10484291
Molecular Weight (calculated)
18827.1 Da
IEP (calculated)
4.789
GRAVY (calculated)
-0.160
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAFLKCLIA AQPDAADWKF LTARLTAETG DSDSTRDYYK EVLIVNPLSF EALFENALPM DQCGEGEAAM RRLEEALHMA AEEKMVKEVR DVKLIMVQIM
101: FLQKNVDEAL MIYNQLTKED PRDFRPYFCR GMIYILLDRN EEVKVLSYCL NGLLCMKKGE THK
101: FLQKNVDEAL MIYNQLTKED PRDFRPYFCR GMIYILLDRN EEVKVLSYCL NGLLCMKKGE THK
001: MISSLSASSS LVSSFVAVKA TPVTGPLIPR RDLLSIRIRA SSNQNSSGYC FPEKFKSFAK SAILIGAAVS MTGKFSTLPV KAESPVTTIE KTYEEVKEEK
101: LSEITPLSEL LDSTPEAVET LRSLLQQKLE KGEDEEALKL LERLVAAQPE ETEWKFLMAR LLGEMGRPEN ARQMFEEILQ RNPLSFEALF ENALLMDRSG
201: EGNAVLQRLE DALAVAEAEY LVKEARDVRL IIAQIHFLQK NVDEALKSYE QLTKEDPKDF RPYFCRGMIY SLLDKNVEAK EQFAKYRELS PKKFEVEGYL
301: RTPLSKMKLF GGSEEN
101: LSEITPLSEL LDSTPEAVET LRSLLQQKLE KGEDEEALKL LERLVAAQPE ETEWKFLMAR LLGEMGRPEN ARQMFEEILQ RNPLSFEALF ENALLMDRSG
201: EGNAVLQRLE DALAVAEAEY LVKEARDVRL IIAQIHFLQK NVDEALKSYE QLTKEDPKDF RPYFCRGMIY SLLDKNVEAK EQFAKYRELS PKKFEVEGYL
301: RTPLSKMKLF GGSEEN
Arabidopsis Description
SG1protein SLOW GREEN 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LS48]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.