Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37778 | Soybean | nucleus | 94.35 | 92.5 |
| VIT_10s0003g02680.t01 | Wine grape | vacuole | 66.21 | 68.98 |
| PGSC0003DMT400007944 | Potato | cytosol, plastid | 67.03 | 64.79 |
| Solyc02g071260.2.1 | Tomato | cytosol, plastid | 67.03 | 64.73 |
| KRH36969 | Soybean | nucleus | 60.93 | 58.84 |
| CDX78827 | Canola | cytosol | 57.74 | 58.7 |
| CDY61670 | Canola | cytosol | 59.65 | 58.69 |
| AT4G18130.1 | Thale cress | cytosol | 59.38 | 58.63 |
| Bra013286.1-P | Field mustard | cytosol | 59.47 | 58.62 |
| KRH11936 | Soybean | nucleus | 60.56 | 57.88 |
| KRG90417 | Soybean | nucleus | 47.91 | 46.84 |
| KRG96653 | Soybean | nucleus | 47.63 | 46.28 |
| KRH33709 | Soybean | endoplasmic reticulum, golgi, plastid | 48.18 | 44.42 |
| KRH68382 | Soybean | endoplasmic reticulum, plastid, vacuole | 38.43 | 43.33 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr15:+:22678321..22689978
Molecular Weight (calculated)
122733.0 Da
IEP (calculated)
5.862
GRAVY (calculated)
-0.156
Length
1098 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSFGSRGKLK DTSLSTSAES NTNTKRDKIL AQYSADAEIL AEFELSGVSG KSFDYSRMVL DPSRLVSEQK MTAYLSKIQR GGLIQPFGCM LAIEESTFRI
0101: IGYSDNCFQL LGLERQIDSK QFMNLIGVDA TTLFTPPSGA SLAKAAASRE ISLLNPIWVY ARTTQKPFYA ILHRIDVGVV IDLEPARMSD PTLSLAGAVQ
0201: SQKLAVRAIS RLQSLPGEDI GLLCDTVVEE VQKLTGYDRV MVYKFHEDDH GEVVSEIRRS DLEPYLGLHY PATDIPQASR FLFKQNRVRI LVNSTLRLPH
0301: GCHTQYMANM GSIASLVMAI IVNGKDATRL WGLLVCHHTS PRSVSFLVRY ACEFLMQTFG LQLYMEIQLA SQMAEKRILK TQTLLCDMLL RDAPFGIVNQ
0401: SPSIMDLVKC DGAALYYEGN CWLLGTTPTE AQVKDIAEWL LSNHGDSTGL TTDSLADAGY PGAASLGDAV CGMATARINS KHFLFWFRSH TAKEVKWGGA
0501: KHHPEDKDDG GKMNPRSSFK AFLEVVKSKS LPWEVLEINA IHSLQLIIRD SFQDTENTGP KTLSYVQKSD TAAGGMDELS SVALQMVRLI ETATVPIFGV
0601: DLGGVINGWN TKIAELTGLQ ASEAMGKSLV NEIIHADSGD TFKNTLSRAL QGQEDKNVEL KIKHFGLDQQ QEVACLMVNA CISRDYTDAI VGVCFVGEDI
0701: TYEKVVQDKF IKLEGDYKAI IQSLSPLIPP IFSSDENVCC SEWNAAMERL TGWKRDEVIG KLLPGEIFGS FCRLKGQDTL TNFMILLYRG ISRQDSEKLP
0801: FGFFHRNGEF IETYITANKK IDAGGNMLGC FCFLQIVMPD LNQPSEEHNP RGRESISESE EAYILQEMKK PLNGIRFTRK LLENTTVSEN QKQFLDTSDA
0901: CERQIMAIIE DTHLGSINED TLQLNVEEFV LGNILDAIVS QVMMLIREKN LQLFHEIPDE IKMLSLYGDQ IRLQVVLSDF LLNVVSHTAS PNGWVEIKVS
1001: PTLKIIQDGD EFIHLQFRIA HSGQGIPSNV IHEMVEGGNQ WTTQEGLGLY MSRKILRRMS GHVRYQRGQD MCYFLIDLEI RTRKERQRNL HAKTSMLS
0101: IGYSDNCFQL LGLERQIDSK QFMNLIGVDA TTLFTPPSGA SLAKAAASRE ISLLNPIWVY ARTTQKPFYA ILHRIDVGVV IDLEPARMSD PTLSLAGAVQ
0201: SQKLAVRAIS RLQSLPGEDI GLLCDTVVEE VQKLTGYDRV MVYKFHEDDH GEVVSEIRRS DLEPYLGLHY PATDIPQASR FLFKQNRVRI LVNSTLRLPH
0301: GCHTQYMANM GSIASLVMAI IVNGKDATRL WGLLVCHHTS PRSVSFLVRY ACEFLMQTFG LQLYMEIQLA SQMAEKRILK TQTLLCDMLL RDAPFGIVNQ
0401: SPSIMDLVKC DGAALYYEGN CWLLGTTPTE AQVKDIAEWL LSNHGDSTGL TTDSLADAGY PGAASLGDAV CGMATARINS KHFLFWFRSH TAKEVKWGGA
0501: KHHPEDKDDG GKMNPRSSFK AFLEVVKSKS LPWEVLEINA IHSLQLIIRD SFQDTENTGP KTLSYVQKSD TAAGGMDELS SVALQMVRLI ETATVPIFGV
0601: DLGGVINGWN TKIAELTGLQ ASEAMGKSLV NEIIHADSGD TFKNTLSRAL QGQEDKNVEL KIKHFGLDQQ QEVACLMVNA CISRDYTDAI VGVCFVGEDI
0701: TYEKVVQDKF IKLEGDYKAI IQSLSPLIPP IFSSDENVCC SEWNAAMERL TGWKRDEVIG KLLPGEIFGS FCRLKGQDTL TNFMILLYRG ISRQDSEKLP
0801: FGFFHRNGEF IETYITANKK IDAGGNMLGC FCFLQIVMPD LNQPSEEHNP RGRESISESE EAYILQEMKK PLNGIRFTRK LLENTTVSEN QKQFLDTSDA
0901: CERQIMAIIE DTHLGSINED TLQLNVEEFV LGNILDAIVS QVMMLIREKN LQLFHEIPDE IKMLSLYGDQ IRLQVVLSDF LLNVVSHTAS PNGWVEIKVS
1001: PTLKIIQDGD EFIHLQFRIA HSGQGIPSNV IHEMVEGGNQ WTTQEGLGLY MSRKILRRMS GHVRYQRGQD MCYFLIDLEI RTRKERQRNL HAKTSMLS
0001: MGFESSSSAA SNMKPQPQKS NTAQYSVDAA LFADFAQSIY TGKSFNYSKS VISPPNHVPD EHITAYLSNI QRGGLVQPFG CLIAVEEPSF RILGLSDNSS
0101: DFLGLLSLPS TSHSGEFDKV KGLIGIDART LFTPSSGASL SKAASFTEIS LLNPVLVHSR TTQKPFYAIL HRIDAGIVMD LEPAKSGDPA LTLAGAVQSQ
0201: KLAVRAISRL QSLPGGDIGA LCDTVVEDVQ RLTGYDRVMV YQFHEDDHGE VVSEIRRSDL EPYLGLHYPA TDIPQAARFL FKQNRVRMIC DCNATPVKVV
0301: QSEELKRPLC LVNSTLRAPH GCHTQYMANM GSVASLALAI VVKGKDSSKL WGLVVGHHCS PRYVPFPLRY ACEFLMQAFG LQLQMELQLA SQLAEKKAMR
0401: TQTLLCDMLL RDTVSAIVTQ SPGIMDLVKC DGAALYYKGK CWLVGVTPNE SQVKDLVNWL VENHGDDSTG LTTDSLVDAG YPGAISLGDA VCGVAAAGFS
0501: SKDYLLWFRS NTASAIKWGG AKHHPKDKDD AGRMHPRSSF TAFLEVAKSR SLPWEISEID AIHSLRLIMR ESFTSSRPVL SGNGVARDAN ELTSFVCEMV
0601: RVIETATAPI FGVDSSGCIN GWNKKTAEMT GLLASEAMGK SLADEIVQEE SRAALESLLC KALQGEEEKS VMLKLRKFGQ NNHPDYSSDV CVLVNSCTSR
0701: DYTENIIGVC FVGQDITSEK AITDRFIRLQ GDYKTIVQSL NPLIPPIFAS DENACCSEWN AAMEKLTGWS KHEVIGKMLP GEVFGVFCKV KCQDSLTKFL
0801: ISLYQGIAGD NVPESSLVEF FNKEGKYIEA SLTANKSTNI EGKVIRCFFF LQIINKESGL SCPELKESAQ SLNELTYVRQ EIKNPLNGIR FAHKLLESSE
0901: ISASQRQFLE TSDACEKQIT TIIESTDLKS IEEGKLQLET EEFRLENILD TIISQVMIIL RERNSQLRVE VAEEIKTLPL NGDRVKLQLI LADLLRNIVN
1001: HAPFPNSWVG ISISPGQELS RDNGRYIHLQ FRMIHPGKGL PSEMLSDMFE TRDGWVTPDG LGLKLSRKLL EQMNGRVSYV REDERCFFQV DLQVKTMLGV
1101: ESRGTEGSSS IK
0101: DFLGLLSLPS TSHSGEFDKV KGLIGIDART LFTPSSGASL SKAASFTEIS LLNPVLVHSR TTQKPFYAIL HRIDAGIVMD LEPAKSGDPA LTLAGAVQSQ
0201: KLAVRAISRL QSLPGGDIGA LCDTVVEDVQ RLTGYDRVMV YQFHEDDHGE VVSEIRRSDL EPYLGLHYPA TDIPQAARFL FKQNRVRMIC DCNATPVKVV
0301: QSEELKRPLC LVNSTLRAPH GCHTQYMANM GSVASLALAI VVKGKDSSKL WGLVVGHHCS PRYVPFPLRY ACEFLMQAFG LQLQMELQLA SQLAEKKAMR
0401: TQTLLCDMLL RDTVSAIVTQ SPGIMDLVKC DGAALYYKGK CWLVGVTPNE SQVKDLVNWL VENHGDDSTG LTTDSLVDAG YPGAISLGDA VCGVAAAGFS
0501: SKDYLLWFRS NTASAIKWGG AKHHPKDKDD AGRMHPRSSF TAFLEVAKSR SLPWEISEID AIHSLRLIMR ESFTSSRPVL SGNGVARDAN ELTSFVCEMV
0601: RVIETATAPI FGVDSSGCIN GWNKKTAEMT GLLASEAMGK SLADEIVQEE SRAALESLLC KALQGEEEKS VMLKLRKFGQ NNHPDYSSDV CVLVNSCTSR
0701: DYTENIIGVC FVGQDITSEK AITDRFIRLQ GDYKTIVQSL NPLIPPIFAS DENACCSEWN AAMEKLTGWS KHEVIGKMLP GEVFGVFCKV KCQDSLTKFL
0801: ISLYQGIAGD NVPESSLVEF FNKEGKYIEA SLTANKSTNI EGKVIRCFFF LQIINKESGL SCPELKESAQ SLNELTYVRQ EIKNPLNGIR FAHKLLESSE
0901: ISASQRQFLE TSDACEKQIT TIIESTDLKS IEEGKLQLET EEFRLENILD TIISQVMIIL RERNSQLRVE VAEEIKTLPL NGDRVKLQLI LADLLRNIVN
1001: HAPFPNSWVG ISISPGQELS RDNGRYIHLQ FRMIHPGKGL PSEMLSDMFE TRDGWVTPDG LGLKLSRKLL EQMNGRVSYV REDERCFFQV DLQVKTMLGV
1101: ESRGTEGSSS IK
Arabidopsis Description
PHYEPhytochrome E [Source:UniProtKB/Swiss-Prot;Acc:P42498]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.