Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- vacuole 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12820 | Soybean | cytosol | 92.5 | 94.35 |
| VIT_10s0003g02680.t01 | Wine grape | vacuole | 67.86 | 72.11 |
| PGSC0003DMT400007944 | Potato | cytosol, plastid | 68.66 | 67.69 |
| Solyc02g071260.2.1 | Tomato | cytosol, plastid | 68.3 | 67.28 |
| AT4G18130.1 | Thale cress | cytosol | 61.43 | 61.87 |
| Bra013286.1-P | Field mustard | cytosol | 61.43 | 61.76 |
| CDX78827 | Canola | cytosol | 59.55 | 61.76 |
| CDY61670 | Canola | cytosol | 61.43 | 61.65 |
| KRH36969 | Soybean | nucleus | 61.79 | 60.86 |
| KRH11936 | Soybean | nucleus | 61.25 | 59.7 |
| KRG90417 | Soybean | nucleus | 49.02 | 48.89 |
| KRG96653 | Soybean | nucleus | 48.3 | 47.88 |
| KRH33709 | Soybean | endoplasmic reticulum, golgi, plastid | 49.2 | 46.26 |
| KRH68382 | Soybean | endoplasmic reticulum, plastid, vacuole | 38.84 | 44.66 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr9:+:11694306..11700663
Molecular Weight (calculated)
124863.0 Da
IEP (calculated)
5.989
GRAVY (calculated)
-0.156
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSFGSRGKLK DTSLSTSAES NMNSKRDKIL AQYSADAEIL AEFEQSGVSG KSFDYSRMVL DPPRLVSEQK MTAYLSKIQR GGLIQPFGCM LAIEESTFRI
0101: IGFSDNCFQL LGLERQIDSK QFMGLIGVDA TTLFTPPSGA SLAKAAASRE ISLLNPIWVY ARTTQKPFYA ILHRIDVGVV IDLEPARMSD PALSLAGAVQ
0201: SQKLAVRAIS RLQSLPGEDI GLLCDTVVEE VQKLTGYDRV MVYKFHEDDH GEVVSEIRRS DLEPYLGLHY PATDIPQASR FLFKQNRVRM ICDCHAKPVK
0301: VIQSEELRQP LCLVNSTLRL PHGCHTQYMA NMGSIASLVM AIVVNGKHAT RLWGLLVCHH TSPRYVSFPV RYACEFLMQA FGLQLYMEIQ LASQMAEKRI
0401: LKTQTLLCDM LLRDAPLGIV NQSPSIMDLV KCDGAALYYE GNCWLLGTTP TEAQVKDIAE WLLSNHGDST GLTTDSLADA GYPGAASLGD AVCGMATARI
0501: NSKHFLFWFR SHTAKEVKWG GAKHHPEDKD DGGKMNPRSS FKAFLEVVKS KSLPWEVPEI NAIHSLQLII RDSFQDTENT GPKTLTYVQK SDTATGGMDE
0601: LSSVALEMVR LIETATVPIF GVDLGGVING WNTKIAELTG LQASEAMGKS LVNEIIHADS CDTFKSTLSR ALQGQEDKNV ELKIKHFGLD QQQEVAYLVV
0701: NACTSRDHTD AIVGVCFVGQ DITCEKVVQD KFIQLEGDYK AIIQSLSPLI PPIFSSDENA CCSEWNAAME RLTGWKRDEV IGKLLPGEIF GSFCRLKGQD
0801: TLTNFMILLY RGISGQDSEK IPFGFFDRNG EFIETYITAN KRIDTGGNML GCFCFLQIVM PDLNQPSEEH KPRGRESISE SKELAYILQE MKKPLNGIRF
0901: TRKLLENTAV SENQKQFLDT SDACERQILA IIEDTNLGSI NEGTLQLNME EFVLGNILDA IVSQVMMLIR EKNLQLFHEI PDEIKMLSLY GDQIRLQVVL
1001: SDFLLNVVSH TASPNGWVEI KISPGLTLQD GNEFIHLKFS MAHSGQGIPS NVLHDMFEGG NQWTTQEGLG LYMSRKILSR ISGHVQYVRE QNKCYFLIDL
1101: EIRKRKERKR NLHAETSMLS
0101: IGFSDNCFQL LGLERQIDSK QFMGLIGVDA TTLFTPPSGA SLAKAAASRE ISLLNPIWVY ARTTQKPFYA ILHRIDVGVV IDLEPARMSD PALSLAGAVQ
0201: SQKLAVRAIS RLQSLPGEDI GLLCDTVVEE VQKLTGYDRV MVYKFHEDDH GEVVSEIRRS DLEPYLGLHY PATDIPQASR FLFKQNRVRM ICDCHAKPVK
0301: VIQSEELRQP LCLVNSTLRL PHGCHTQYMA NMGSIASLVM AIVVNGKHAT RLWGLLVCHH TSPRYVSFPV RYACEFLMQA FGLQLYMEIQ LASQMAEKRI
0401: LKTQTLLCDM LLRDAPLGIV NQSPSIMDLV KCDGAALYYE GNCWLLGTTP TEAQVKDIAE WLLSNHGDST GLTTDSLADA GYPGAASLGD AVCGMATARI
0501: NSKHFLFWFR SHTAKEVKWG GAKHHPEDKD DGGKMNPRSS FKAFLEVVKS KSLPWEVPEI NAIHSLQLII RDSFQDTENT GPKTLTYVQK SDTATGGMDE
0601: LSSVALEMVR LIETATVPIF GVDLGGVING WNTKIAELTG LQASEAMGKS LVNEIIHADS CDTFKSTLSR ALQGQEDKNV ELKIKHFGLD QQQEVAYLVV
0701: NACTSRDHTD AIVGVCFVGQ DITCEKVVQD KFIQLEGDYK AIIQSLSPLI PPIFSSDENA CCSEWNAAME RLTGWKRDEV IGKLLPGEIF GSFCRLKGQD
0801: TLTNFMILLY RGISGQDSEK IPFGFFDRNG EFIETYITAN KRIDTGGNML GCFCFLQIVM PDLNQPSEEH KPRGRESISE SKELAYILQE MKKPLNGIRF
0901: TRKLLENTAV SENQKQFLDT SDACERQILA IIEDTNLGSI NEGTLQLNME EFVLGNILDA IVSQVMMLIR EKNLQLFHEI PDEIKMLSLY GDQIRLQVVL
1001: SDFLLNVVSH TASPNGWVEI KISPGLTLQD GNEFIHLKFS MAHSGQGIPS NVLHDMFEGG NQWTTQEGLG LYMSRKILSR ISGHVQYVRE QNKCYFLIDL
1101: EIRKRKERKR NLHAETSMLS
0001: MGFESSSSAA SNMKPQPQKS NTAQYSVDAA LFADFAQSIY TGKSFNYSKS VISPPNHVPD EHITAYLSNI QRGGLVQPFG CLIAVEEPSF RILGLSDNSS
0101: DFLGLLSLPS TSHSGEFDKV KGLIGIDART LFTPSSGASL SKAASFTEIS LLNPVLVHSR TTQKPFYAIL HRIDAGIVMD LEPAKSGDPA LTLAGAVQSQ
0201: KLAVRAISRL QSLPGGDIGA LCDTVVEDVQ RLTGYDRVMV YQFHEDDHGE VVSEIRRSDL EPYLGLHYPA TDIPQAARFL FKQNRVRMIC DCNATPVKVV
0301: QSEELKRPLC LVNSTLRAPH GCHTQYMANM GSVASLALAI VVKGKDSSKL WGLVVGHHCS PRYVPFPLRY ACEFLMQAFG LQLQMELQLA SQLAEKKAMR
0401: TQTLLCDMLL RDTVSAIVTQ SPGIMDLVKC DGAALYYKGK CWLVGVTPNE SQVKDLVNWL VENHGDDSTG LTTDSLVDAG YPGAISLGDA VCGVAAAGFS
0501: SKDYLLWFRS NTASAIKWGG AKHHPKDKDD AGRMHPRSSF TAFLEVAKSR SLPWEISEID AIHSLRLIMR ESFTSSRPVL SGNGVARDAN ELTSFVCEMV
0601: RVIETATAPI FGVDSSGCIN GWNKKTAEMT GLLASEAMGK SLADEIVQEE SRAALESLLC KALQGEEEKS VMLKLRKFGQ NNHPDYSSDV CVLVNSCTSR
0701: DYTENIIGVC FVGQDITSEK AITDRFIRLQ GDYKTIVQSL NPLIPPIFAS DENACCSEWN AAMEKLTGWS KHEVIGKMLP GEVFGVFCKV KCQDSLTKFL
0801: ISLYQGIAGD NVPESSLVEF FNKEGKYIEA SLTANKSTNI EGKVIRCFFF LQIINKESGL SCPELKESAQ SLNELTYVRQ EIKNPLNGIR FAHKLLESSE
0901: ISASQRQFLE TSDACEKQIT TIIESTDLKS IEEGKLQLET EEFRLENILD TIISQVMIIL RERNSQLRVE VAEEIKTLPL NGDRVKLQLI LADLLRNIVN
1001: HAPFPNSWVG ISISPGQELS RDNGRYIHLQ FRMIHPGKGL PSEMLSDMFE TRDGWVTPDG LGLKLSRKLL EQMNGRVSYV REDERCFFQV DLQVKTMLGV
1101: ESRGTEGSSS IK
0101: DFLGLLSLPS TSHSGEFDKV KGLIGIDART LFTPSSGASL SKAASFTEIS LLNPVLVHSR TTQKPFYAIL HRIDAGIVMD LEPAKSGDPA LTLAGAVQSQ
0201: KLAVRAISRL QSLPGGDIGA LCDTVVEDVQ RLTGYDRVMV YQFHEDDHGE VVSEIRRSDL EPYLGLHYPA TDIPQAARFL FKQNRVRMIC DCNATPVKVV
0301: QSEELKRPLC LVNSTLRAPH GCHTQYMANM GSVASLALAI VVKGKDSSKL WGLVVGHHCS PRYVPFPLRY ACEFLMQAFG LQLQMELQLA SQLAEKKAMR
0401: TQTLLCDMLL RDTVSAIVTQ SPGIMDLVKC DGAALYYKGK CWLVGVTPNE SQVKDLVNWL VENHGDDSTG LTTDSLVDAG YPGAISLGDA VCGVAAAGFS
0501: SKDYLLWFRS NTASAIKWGG AKHHPKDKDD AGRMHPRSSF TAFLEVAKSR SLPWEISEID AIHSLRLIMR ESFTSSRPVL SGNGVARDAN ELTSFVCEMV
0601: RVIETATAPI FGVDSSGCIN GWNKKTAEMT GLLASEAMGK SLADEIVQEE SRAALESLLC KALQGEEEKS VMLKLRKFGQ NNHPDYSSDV CVLVNSCTSR
0701: DYTENIIGVC FVGQDITSEK AITDRFIRLQ GDYKTIVQSL NPLIPPIFAS DENACCSEWN AAMEKLTGWS KHEVIGKMLP GEVFGVFCKV KCQDSLTKFL
0801: ISLYQGIAGD NVPESSLVEF FNKEGKYIEA SLTANKSTNI EGKVIRCFFF LQIINKESGL SCPELKESAQ SLNELTYVRQ EIKNPLNGIR FAHKLLESSE
0901: ISASQRQFLE TSDACEKQIT TIIESTDLKS IEEGKLQLET EEFRLENILD TIISQVMIIL RERNSQLRVE VAEEIKTLPL NGDRVKLQLI LADLLRNIVN
1001: HAPFPNSWVG ISISPGQELS RDNGRYIHLQ FRMIHPGKGL PSEMLSDMFE TRDGWVTPDG LGLKLSRKLL EQMNGRVSYV REDERCFFQV DLQVKTMLGV
1101: ESRGTEGSSS IK
Arabidopsis Description
PHYEPhytochrome E [Source:UniProtKB/Swiss-Prot;Acc:P42498]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.