Subcellular Localization
min:
: max
Winner_takes_all: vacuole, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 3
- extracellular 2
- golgi 2
- plasma membrane 2
- vacuole 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96653 | Soybean | nucleus | 77.72 | 66.99 |
| KRG90417 | Soybean | nucleus | 70.02 | 60.73 |
| VIT_14s0060g00100.t01 | Wine grape | nucleus | 67.45 | 58.45 |
| KRH33709 | Soybean | endoplasmic reticulum, golgi, plastid | 69.71 | 57.01 |
| AT1G09570.3 | Thale cress | cytosol | 65.2 | 56.39 |
| Solyc10g044670.1.1 | Tomato | extracellular | 64.89 | 56.28 |
| CDY06362 | Canola | cytosol, plastid | 64.68 | 56.2 |
| PGSC0003DMT400040772 | Potato | cytosol | 64.78 | 56.19 |
| Bra031672.1-P | Field mustard | cytosol, plastid | 64.58 | 56.11 |
| CDY22632 | Canola | cytosol, plastid | 64.68 | 56.1 |
| CDY50896 | Canola | endoplasmic reticulum, plastid, vacuole | 65.3 | 54.78 |
| TraesCS4B01G052000.1 | Wheat | mitochondrion | 49.18 | 54.12 |
| CDX93501 | Canola | cytosol | 65.71 | 53.24 |
| GSMUA_Achr5P27310_001 | Banana | cytosol | 8.42 | 52.9 |
| Bra020013.1-P | Field mustard | cytosol | 65.5 | 52.73 |
| HORVU0Hr1G023250.4 | Barley | cytosol | 18.48 | 51.72 |
| HORVU1Hr1G068750.7 | Barley | cytosol | 18.58 | 50.99 |
| GSMUA_Achr8P06130_001 | Banana | cytosol, mitochondrion | 56.06 | 50.79 |
| Zm00001d008542_P001 | Maize | cytosol | 12.32 | 49.59 |
| Os03t0719800-01 | Rice | plastid | 55.95 | 48.32 |
| TraesCS4D01G052200.1 | Wheat | plastid | 56.16 | 48.24 |
| Zm00001d033799_P001 | Maize | cytosol | 55.95 | 48.19 |
| HORVU4Hr1G008610.2 | Barley | mitochondrion | 55.85 | 48.14 |
| TraesCS4A01G262900.1 | Wheat | mitochondrion | 55.75 | 48.05 |
| Zm00001d013402_P005 | Maize | nucleus | 55.75 | 48.01 |
| OQU91090 | Sorghum | nucleus | 55.65 | 47.92 |
| OQU91089 | Sorghum | cytosol | 8.42 | 45.81 |
| KRH11936 | Soybean | nucleus | 47.23 | 40.03 |
| KRH36969 | Soybean | nucleus | 46.41 | 39.75 |
| KRH37778 | Soybean | nucleus | 44.66 | 38.84 |
| KRH12820 | Soybean | cytosol | 43.33 | 38.43 |
Protein Annotations
| MapMan:26.1.1.1 | Gene3D:3.30.450.20 | Gene3D:3.30.450.270 | Gene3D:3.30.450.40 | UniProt:A0A0R0KN47 | EMBL:ACUP02002108 |
| InterPro:GAF | InterPro:GAF-like_dom_sf | EnsemblPlantsGene:GLYMA_03G227300 | GO:GO:0000155 | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009584 | GO:GO:0009605 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0023014 |
| GO:GO:0038023 | InterPro:HATPase_C | InterPro:HisK_dim/P | InterPro:IPR000014 | InterPro:IPR016132 | InterPro:IPR029016 |
| EnsemblPlants:KRH68382 | ProteinID:KRH68382 | ProteinID:KRH68382.1 | InterPro:PAS | InterPro:PAS-like_dom_sf | InterPro:PAS_2 |
| InterPro:PAS_fold | PFAM:PF00360 | PFAM:PF00989 | PFAM:PF01590 | PFAM:PF08446 | PRINTS:PR01033 |
| PFscan:PS50046 | PFscan:PS50112 | PANTHER:PTHR43719 | PANTHER:PTHR43719:SF13 | InterPro:Phyto_chromo_attachment | InterPro:Phytochrome |
| InterPro:Phytochrome_cen-reg | SMART:SM00091 | SMART:SM00388 | SUPFAM:SSF55781 | SUPFAM:SSF55785 | SignalP:SignalP-noTM |
| TIGRFAMs:TIGR00229 | UniParc:UPI0006EE12D6 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:42918424..42923054
Molecular Weight (calculated)
108453.0 Da
IEP (calculated)
6.000
GRAVY (calculated)
-0.165
Length
974 amino acids
Sequence
(BLAST)
(BLAST)
001: MIILVYVLGM MFLSFPGQLR SSRPSARRIS QTSLDAKPHA TFEESGSSFD YSNSVKMSPA GTGGGTVSGE HEPKSDRAAT TAYLHQMQKG KLIQPFGCLL
101: VLDEKTYKVI AYSENAPEML TMASHAVPSV DDHPALDIGT YIRTIFTAPS IASIHKVLGF GDLSLHNTIL VHCKTFGNPF YAIIHLVTGS TIIDFESVQP
201: PEVPMTASGS LQSYYKLAAK ATTRLQSLAT VNMETLCNTM VQEVFELTGY DRVMAYKFHD DDHGEVIAEV KRPGLEPYLG LHYPATDIPH ATRFSLWRTR
301: CVIQDKKIPF DLALYGSTLR AAHSCHLQFM VNMNSSASLV LAVVINDNDE DGNSSDDAAV QQPHKSSTSL WGLVVCHHTT PKFVPQGRIC HPRVGKELEI
401: EYQIVEKNIL RTQTHLFDVL TRDEPLAIVS QSPNMMDLVK CDGATLLYKN KVWRLGVTPS ESQIREIALW LSQCHRDSTG FFTDSLSDAG FPGAAALGDI
501: ACGMTSARIT SKDIVFWFWS HTAAEIRCDG AKHEPGERDD VVKNRSLLWK VYETDAIHSL HLILRDAFKE TESMKIATYA PNSRLGCLNI EETQGLEAVT
601: NEMVRLIETA TVPVLAVDVN GMVNGWNTKI AELTGLPSDE AMGKHFLTLV EDFSVDRVKK MLHMALQGEE EEERNVQFEI NTYDFKIDSG PASLVVNACA
701: SRDLQDNIVG VCFVAQGITA QKTMMEKFPR IEGDYKAIVQ NPNPSIPPLF STDEFGWCCE WNSAMAKLTG WKREEVMDKM LLGEIFGTQI AGCRLRNHEA
801: VVNFSIVLNT AMAGLETEKV PIGFFTRDGK HVESSPELQQ ALHIQLLSEQ TAMKRLKDLN YLKRQIRNPL YGIMFSRKLL EGTELGAEQK QFLQMSTQCQ
901: HQLSKILDDS DLDSIIDGIT HDGFGVPETL LNQMFGRDGH ESEEGISMLI SRKLMKGDVR YIREAGKIIF HLIC
101: VLDEKTYKVI AYSENAPEML TMASHAVPSV DDHPALDIGT YIRTIFTAPS IASIHKVLGF GDLSLHNTIL VHCKTFGNPF YAIIHLVTGS TIIDFESVQP
201: PEVPMTASGS LQSYYKLAAK ATTRLQSLAT VNMETLCNTM VQEVFELTGY DRVMAYKFHD DDHGEVIAEV KRPGLEPYLG LHYPATDIPH ATRFSLWRTR
301: CVIQDKKIPF DLALYGSTLR AAHSCHLQFM VNMNSSASLV LAVVINDNDE DGNSSDDAAV QQPHKSSTSL WGLVVCHHTT PKFVPQGRIC HPRVGKELEI
401: EYQIVEKNIL RTQTHLFDVL TRDEPLAIVS QSPNMMDLVK CDGATLLYKN KVWRLGVTPS ESQIREIALW LSQCHRDSTG FFTDSLSDAG FPGAAALGDI
501: ACGMTSARIT SKDIVFWFWS HTAAEIRCDG AKHEPGERDD VVKNRSLLWK VYETDAIHSL HLILRDAFKE TESMKIATYA PNSRLGCLNI EETQGLEAVT
601: NEMVRLIETA TVPVLAVDVN GMVNGWNTKI AELTGLPSDE AMGKHFLTLV EDFSVDRVKK MLHMALQGEE EEERNVQFEI NTYDFKIDSG PASLVVNACA
701: SRDLQDNIVG VCFVAQGITA QKTMMEKFPR IEGDYKAIVQ NPNPSIPPLF STDEFGWCCE WNSAMAKLTG WKREEVMDKM LLGEIFGTQI AGCRLRNHEA
801: VVNFSIVLNT AMAGLETEKV PIGFFTRDGK HVESSPELQQ ALHIQLLSEQ TAMKRLKDLN YLKRQIRNPL YGIMFSRKLL EGTELGAEQK QFLQMSTQCQ
901: HQLSKILDDS DLDSIIDGIT HDGFGVPETL LNQMFGRDGH ESEEGISMLI SRKLMKGDVR YIREAGKIIF HLIC
0001: MSGSRPTQSS EGSRRSRHSA RIIAQTTVDA KLHADFEESG SSFDYSTSVR VTGPVVENQP PRSDKVTTTY LHHIQKGKLI QPFGCLLALD EKTFKVIAYS
0101: ENASELLTMA SHAVPSVGEH PVLGIGTDIR SLFTAPSASA LQKALGFGDV SLLNPILVHC RTSAKPFYAI IHRVTGSIII DFEPVKPYEV PMTAAGALQS
0201: YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM AYKFHEDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHARV
0301: LQDEKLSFDL TLCGSTLRAP HSCHLQYMAN MDSIASLVMA VVVNEEDGEG DAPDATTQPQ KRKRLWGLVV CHNTTPRFVP FPLRYACEFL AQVFAIHVNK
0401: EVELDNQMVE KNILRTQTLL CDMLMRDAPL GIVSQSPNIM DLVKCDGAAL LYKDKIWKLG TTPSEFHLQE IASWLCEYHM DSTGLSTDSL HDAGFPRALS
0501: LGDSVCGMAA VRISSKDMIF WFRSHTAGEV RWGGAKHDPD DRDDARRMHP RSSFKAFLEV VKTRSLPWKD YEMDAIHSLQ LILRNAFKDS ETTDVNTKVI
0601: YSKLNDLKID GIQELEAVTS EMVRLIETAT VPILAVDSDG LVNGWNTKIA ELTGLSVDEA IGKHFLTLVE DSSVEIVKRM LENALEGTEE QNVQFEIKTH
0701: LSRADAGPIS LVVNACASRD LHENVVGVCF VAHDLTGQKT VMDKFTRIEG DYKAIIQNPN PLIPPIFGTD EFGWCTEWNP AMSKLTGLKR EEVIDKMLLG
0801: EVFGTQKSCC RLKNQEAFVN LGIVLNNAVT SQDPEKVSFA FFTRGGKYVE CLLCVSKKLD REGVVTGVFC FLQLASHELQ QALHVQRLAE RTAVKRLKAL
0901: AYIKRQIRNP LSGIMFTRKM IEGTELGPEQ RRILQTSALC QKQLSKILDD SDLESIIEGC LDLEMKEFTL NEVLTASTSQ VMMKSNGKSV RITNETGEEV
1001: MSDTLYGDSI RLQQVLADFM LMAVNFTPSG GQLTVSASLR KDQLGRSVHL ANLEIRLTHT GAGIPEFLLN QMFGTEEDVS EEGLSLMVSR KLVKLMNGDV
1101: QYLRQAGKSS FIITAELAAA NK
0101: ENASELLTMA SHAVPSVGEH PVLGIGTDIR SLFTAPSASA LQKALGFGDV SLLNPILVHC RTSAKPFYAI IHRVTGSIII DFEPVKPYEV PMTAAGALQS
0201: YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM AYKFHEDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHARV
0301: LQDEKLSFDL TLCGSTLRAP HSCHLQYMAN MDSIASLVMA VVVNEEDGEG DAPDATTQPQ KRKRLWGLVV CHNTTPRFVP FPLRYACEFL AQVFAIHVNK
0401: EVELDNQMVE KNILRTQTLL CDMLMRDAPL GIVSQSPNIM DLVKCDGAAL LYKDKIWKLG TTPSEFHLQE IASWLCEYHM DSTGLSTDSL HDAGFPRALS
0501: LGDSVCGMAA VRISSKDMIF WFRSHTAGEV RWGGAKHDPD DRDDARRMHP RSSFKAFLEV VKTRSLPWKD YEMDAIHSLQ LILRNAFKDS ETTDVNTKVI
0601: YSKLNDLKID GIQELEAVTS EMVRLIETAT VPILAVDSDG LVNGWNTKIA ELTGLSVDEA IGKHFLTLVE DSSVEIVKRM LENALEGTEE QNVQFEIKTH
0701: LSRADAGPIS LVVNACASRD LHENVVGVCF VAHDLTGQKT VMDKFTRIEG DYKAIIQNPN PLIPPIFGTD EFGWCTEWNP AMSKLTGLKR EEVIDKMLLG
0801: EVFGTQKSCC RLKNQEAFVN LGIVLNNAVT SQDPEKVSFA FFTRGGKYVE CLLCVSKKLD REGVVTGVFC FLQLASHELQ QALHVQRLAE RTAVKRLKAL
0901: AYIKRQIRNP LSGIMFTRKM IEGTELGPEQ RRILQTSALC QKQLSKILDD SDLESIIEGC LDLEMKEFTL NEVLTASTSQ VMMKSNGKSV RITNETGEEV
1001: MSDTLYGDSI RLQQVLADFM LMAVNFTPSG GQLTVSASLR KDQLGRSVHL ANLEIRLTHT GAGIPEFLLN QMFGTEEDVS EEGLSLMVSR KLVKLMNGDV
1101: QYLRQAGKSS FIITAELAAA NK
Arabidopsis Description
PHYAphytochrome A [Source:TAIR;Acc:AT1G09570]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.