Factsheet for Bra031672.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06362	Canola	cytosol, plastid	99.11	99.11
AT1G09570.3	Thale cress	cytosol	93.13	92.72
Bra020013.1-P	Field mustard	cytosol	93.31	86.45
VIT_14s0060g00100.t01	Wine grape	nucleus	80.29	80.07
Solyc10g044670.1.1	Tomato	extracellular	78.32	78.18
PGSC0003DMT400040772	Potato	cytosol	77.97	77.83
KRG90417	Soybean	nucleus	77.43	77.29
KRG96653	Soybean	nucleus	73.68	73.1
KRH33709	Soybean	endoplasmic reticulum, golgi, plastid	76.98	72.46
HORVU0Hr1G023250.4	Barley	cytosol	21.14	68.1
GSMUA_Achr8P06130_001	Banana	cytosol, mitochondrion	64.59	67.35
HORVU1Hr1G068750.7	Barley	cytosol	21.32	67.32
TraesCS4B01G052000.1	Wheat	mitochondrion	52.1	65.99
KRH68382	Soybean	endoplasmic reticulum, plastid, vacuole	56.11	64.58
OQU91090	Sorghum	nucleus	63.96	63.4
Zm00001d033799_P001	Maize	cytosol	63.78	63.22
Zm00001d013402_P005	Maize	nucleus	63.69	63.13
Os03t0719800-01	Rice	plastid	63.43	63.03
GSMUA_Achr5P27310_001	Banana	cytosol	8.65	62.58
HORVU4Hr1G008610.2	Barley	mitochondrion	62.18	61.68
TraesCS4A01G262900.1	Wheat	mitochondrion	62.18	61.68
Zm00001d008542_P001	Maize	cytosol	13.29	61.57
TraesCS4D01G052200.1	Wheat	plastid	62.0	61.29
OQU91089	Sorghum	cytosol	9.19	57.54
Bra039485.1-P	Field mustard	cytosol, plastid	50.85	51.03
Bra022192.1-P	Field mustard	cytosol	51.65	48.57
Bra013286.1-P	Field mustard	cytosol	47.28	47.58
Bra001650.1-P	Field mustard	cytosol	5.0	36.6

Protein Annotations

Gene3D:1.10.287.130	MapMan:26.1.1.1	Gene3D:3.30.450.20	Gene3D:3.30.450.270	Gene3D:3.30.450.40	Gene3D:3.30.565.10
ProteinID:AAP92380	ProteinID:AAP92380.1	EMBL:AY324836	EnsemblPlantsGene:Bra031672	EnsemblPlants:Bra031672.1	EnsemblPlants:Bra031672.1-P
ncoils:Coil	InterPro:GAF	InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674
GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009584	GO:GO:0009585
GO:GO:0009605	GO:GO:0009628	GO:GO:0009881	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0017006	GO:GO:0018298	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	GO:GO:0042803
GO:GO:0050896	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:His_kinase_dom	InterPro:IPR000014
InterPro:IPR005467	InterPro:IPR016132	InterPro:IPR029016	InterPro:IPR036890	UniProt:M4ES94	InterPro:PAS
InterPro:PAS-like_dom_sf	InterPro:PAS_2	InterPro:PAS_fold	PFAM:PF00360	PFAM:PF00989	PFAM:PF01590
PFAM:PF02518	PFAM:PF08446	PIRSF:PIRSF000084	PRINTS:PR01033	ScanProsite:PS00245	PFscan:PS50046
PFscan:PS50109	PFscan:PS50112	PANTHER:PTHR43719	PANTHER:PTHR43719:SF13	InterPro:Phyto_chromo_BS	InterPro:Phyto_chromo_attachment
InterPro:Phytochrome	InterPro:Phytochrome_A-E	InterPro:Phytochrome_cen-reg	SMART:SM00065	SMART:SM00091	SMART:SM00387
SMART:SM00388	SUPFAM:SSF55781	SUPFAM:SSF55785	SUPFAM:SSF55874	TIGRFAMs:TIGR00229	UniParc:UPI0002543286
SEG:seg	:	:	:	:	:

Description

AT1G09570 (E=0.0) PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME A); G-protein coupled photoreceptor/ protein histidine kinase/ red or far-red light photoreceptor/ signal transducer

Coordinates

chrA09:+:35299284..35303267

Molecular Weight (calculated)

124144.0 Da

IEP (calculated)

5.758

GRAVY (calculated)

-0.134

Length

1121 amino acids

Sequence
(BLAST)

0001: MSGSRPSQSS EGSSRRSRHS ARIIAQTTVD AKLHADFEES GGSSFDYSTS VRVTTPAVEN NQPPRSDKVT TTYLHHIQKG KLIQPFGCLL ALDEKTFKVI
0101: AYSENAPELL TMASHAVPSV GESPVLGVGT DIRSLFTAPS ASSLQKALGF GDVSLLNPIL VHCRTSAKPF YAIVHRVTGS IVVDFEPVKP YEVPMTAAGA
0201: LQSYKLAAKA ITRLQSLPSG SMERLCDTMV QEVFELTGYD RVMAYKFHED DHGEVVSEVT KPVLEPYLGL HYPATDIPQA ARFLFMKNKV RMIVDCNAKH
0301: VKVLQDEKLS FDLTLCGSTL RAPHTCHLQY MANMDSIASL VMAVVVNEEE DGEATTPQKR KRLWGLVVCH NTTPRFVPFP LRYACEFLAQ VFAIHVNKEV
0401: ELENQIVEKN ILRTQTLLCD MLMRDAPLGI VSQSPNIMDL VKCDGAALLY KDKVWNLGTT PSEFHLQEIA FWLCEHHADS TGLSTDSLHD AGFPGALALG
0501: DSVCGMAAVR ISSRDMIFWF RSHTAGEVRW GGAKHDPDDR DDARRMHPRS SFKAFLEVVK TRSLPWKDYE MDAIHSLQLI LRNAFKDGES SDVNTNIIHS
0601: KLNDLKIDGI QELEAVTSEM VRLIETATVP ILAVDSDGLV NGWNTKIAEL TGLPVDEAIG KDFLTLVEDS SVEIVQRMLE NALEGTEEQN VQFEIKTHLS
0701: RTDAGPISLV VNACASKDLH ENVVGVCFVA HDLTAQKTVM DKFTRIEGDY KAIIQNPNPL IPPIFGTDES GWCTEWNPAM SNLTGLKREE VVEKMLLGEV
0801: FGTQKKSCCR LKNQEAFVNL GIVLNNAVTS EDAEKVPFGF FTRGGKYVEC LLCVSKKLDR EGAVTGVFCF LQLASYELQQ ALHVQRLAER TALKRLKALA
0901: YIKREIRNPL SGIMFTRKMM EGTEIGPEQR MILQTSGLCE KQLSKILDDS DLESIIEGCL DLEMKEFTLN EVLTASTSQV MMKSNGKSVR VTNETKEEVM
1001: SDTLYGDSIR LQQVLADIML MSVNFTPSGG QLTVTASLRK DQLGRSVHLA YLEIRITHTG AGLPEFLLNQ MFGSEEDVSE EGLSLMVSRK LVKLMNGDVQ
1101: YLREAGKSSF IITAELAAAS K

Best Arabidopsis Sequence Match ( AT1G09570.4 )
(BLAST)

0001: MSGSRPTQSS EGSRRSRHSA RIIAQTTVDA KLHADFEESG SSFDYSTSVR VTGPVVENQP PRSDKVTTTY LHHIQKGKLI QPFGCLLALD EKTFKVIAYS
0101: ENASELLTMA SHAVPSVGEH PVLGIGTDIR SLFTAPSASA LQKALGFGDV SLLNPILVHC RTSAKPFYAI IHRVTGSIII DFEPVKPYEV PMTAAGALQS
0201: YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM AYKFHEDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHARV
0301: LQDEKLSFDL TLCGSTLRAP HSCHLQYMAN MDSIASLVMA VVVNEEDGEG DAPDATTQPQ KRKRLWGLVV CHNTTPRFVP FPLRYACEFL AQVFAIHVNK
0401: EVELDNQMVE KNILRTQTLL CDMLMRDAPL GIVSQSPNIM DLVKCDGAAL LYKDKIWKLG TTPSEFHLQE IASWLCEYHM DSTGLSTDSL HDAGFPRALS
0501: LGDSVCGMAA VRISSKDMIF WFRSHTAGEV RWGGAKHDPD DRDDARRMHP RSSFKAFLEV VKTRSLPWKD YEMDAIHSLQ LILRNAFKDS ETTDVNTKVI
0601: YSKLNDLKID GIQELEAVTS EMVRLIETAT VPILAVDSDG LVNGWNTKIA ELTGLSVDEA IGKHFLTLVE DSSVEIVKRM LENALEGTEE QNVQFEIKTH
0701: LSRADAGPIS LVVNACASRD LHENVVGVCF VAHDLTGQKT VMDKFTRIEG DYKAIIQNPN PLIPPIFGTD EFGWCTEWNP AMSKLTGLKR EEVIDKMLLG
0801: EVFGTQKSCC RLKNQEAFVN LGIVLNNAVT SQDPEKVSFA FFTRGGKYVE CLLCVSKKLD REGVVTGVFC FLQLASHELQ QALHVQRLAE RTAVKRLKAL
0901: AYIKRQIRNP LSGIMFTRKM IEGTELGPEQ RRILQTSALC QKQLSKILDD SDLESIIEGC LDLEMKEFTL NEVLTASTSQ VMMKSNGKSV RITNETGEEV
1001: MSDTLYGDSI RLQQVLADFM LMAVNFTPSG GQLTVSASLR KDQLGRSVHL ANLEIRLTHT GAGIPEFLLN QMFGTEEDVS EEGLSLMVSR KLVKLMNGDV
1101: QYLRQAGKSS FIITAELAAA NK

Arabidopsis Description

PHYAphytochrome A [Source:TAIR;Acc:AT1G09570]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.