Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G052000.1 | Wheat | mitochondrion | 75.66 | 96.95 |
| TraesCS4A01G262900.1 | Wheat | mitochondrion | 95.86 | 96.19 |
| HORVU4Hr1G008610.2 | Barley | mitochondrion | 93.83 | 94.16 |
| HORVU0Hr1G023250.4 | Barley | cytosol | 28.04 | 91.38 |
| HORVU1Hr1G068750.7 | Barley | cytosol | 27.95 | 89.3 |
| Os03t0719800-01 | Rice | plastid | 84.13 | 84.57 |
| OQU91090 | Sorghum | nucleus | 83.95 | 84.17 |
| Zm00001d033799_P001 | Maize | cytosol | 83.42 | 83.64 |
| Zm00001d013402_P005 | Maize | nucleus | 83.07 | 83.29 |
| Zm00001d008542_P001 | Maize | cytosol | 16.05 | 75.21 |
| OQU91089 | Sorghum | cytosol | 11.64 | 73.74 |
| GSMUA_Achr8P06130_001 | Banana | cytosol, mitochondrion | 63.76 | 67.26 |
| VIT_14s0060g00100.t01 | Wine grape | nucleus | 63.76 | 64.32 |
| KRG90417 | Soybean | nucleus | 62.26 | 62.87 |
| Solyc10g044670.1.1 | Tomato | extracellular | 61.99 | 62.6 |
| GSMUA_Achr5P27310_001 | Banana | cytosol | 8.55 | 62.58 |
| PGSC0003DMT400040772 | Potato | cytosol | 61.9 | 62.51 |
| CDY06362 | Canola | cytosol, plastid | 61.46 | 62.18 |
| Bra031672.1-P | Field mustard | cytosol, plastid | 61.29 | 62.0 |
| CDY22632 | Canola | cytosol, plastid | 61.29 | 61.89 |
| AT1G09570.3 | Thale cress | cytosol | 61.2 | 61.63 |
| KRG96653 | Soybean | nucleus | 60.76 | 60.97 |
| CDY50896 | Canola | endoplasmic reticulum, plastid, vacuole | 61.29 | 59.86 |
| KRH33709 | Soybean | endoplasmic reticulum, golgi, plastid | 62.26 | 59.28 |
| CDX93501 | Canola | cytosol | 61.38 | 57.9 |
| Bra020013.1-P | Field mustard | cytosol | 61.2 | 57.36 |
| KRH68382 | Soybean | endoplasmic reticulum, plastid, vacuole | 48.24 | 56.16 |
| TraesCS5D01G401000.1 | Wheat | cytosol, plastid | 52.2 | 51.98 |
| TraesCS4D01G183400.1 | Wheat | plastid | 48.32 | 47.08 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:26.1.1.1 | Gene3D:3.30.450.20 | Gene3D:3.30.450.270 | Gene3D:3.30.450.40 | Gene3D:3.30.565.10 |
| ncoils:Coil | InterPro:GAF | InterPro:GAF-like_dom_sf | GO:GO:0000155 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009584 |
| GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009881 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0017006 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0038023 | GO:GO:0042803 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P | InterPro:His_kinase_dom | InterPro:IPR000014 | InterPro:IPR005467 |
| InterPro:IPR016132 | InterPro:IPR029016 | InterPro:IPR036890 | InterPro:PAS | InterPro:PAS-like_dom_sf | InterPro:PAS_2 |
| InterPro:PAS_fold | PFAM:PF00360 | PFAM:PF00512 | PFAM:PF00989 | PFAM:PF01590 | PFAM:PF02518 |
| PFAM:PF08446 | PIRSF:PIRSF000084 | PRINTS:PR01033 | PFscan:PS50046 | PFscan:PS50109 | PFscan:PS50112 |
| PANTHER:PTHR43719 | PANTHER:PTHR43719:SF13 | InterPro:Phyto_chromo_attachment | InterPro:Phytochrome | InterPro:Phytochrome_A-E | InterPro:Phytochrome_cen-reg |
| SMART:SM00065 | SMART:SM00091 | SMART:SM00387 | SMART:SM00388 | SUPFAM:SSF55781 | SUPFAM:SSF55785 |
| SUPFAM:SSF55874 | TIGRFAMs:TIGR00229 | EnsemblPlantsGene:TraesCS4D01G052200 | EnsemblPlants:TraesCS4D01G052200.1 | TIGR:cd00075 | TIGR:cd00082 |
| TIGR:cd00130 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:28456337..28461004
Molecular Weight (calculated)
125624.0 Da
IEP (calculated)
5.597
GRAVY (calculated)
-0.113
Length
1134 amino acids
Sequence
(BLAST)
(BLAST)
0001: MWQEMSSSMP ASSSSSRNRQ STQERVLAQT TLDAQLNAEF EESSDSFDYS KLVEAQRDTP TVLQEGRSEK VIAYLQHIQR GKMIQSFGCL LALDEKSFNV
0101: IAFSENAPEM LTTVSHAVPS VDDPPRLDIG TNVRSLFTDQ GATALHKALG FADVSLLNPI LVQCKSSGKP FYAIVHRATG CLVVDFEPVN PTEFPATAAG
0201: ALQSYKLAAK AISKIQALPG GSMELLCNTV VKEVFELTGY DRVMAYKFHE DNHGEVFAEI TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMICDVRAR
0301: SIKVIEDEAL PFDISLCGSA LRAAHSCHLQ YMENMNSIAS LVMAVVVNEN EEDDEVGSEQ PAQQQKKKIL WGLVVCHHES PRYVPFPLRY ACEFLAQVFA
0401: VHVNKEFEVQ KQLREKSILR MQTILSDMLF KEASPLTIVS GAPNIMDLIK CDGAALLYGG KVWRLGNAPT ESQIRDLALW LSEVHMDSTG LSTESLHDAG
0501: YPGASALGDM VCGMAVAKIN SNDILFWFRS HTAKEIRWGG AKNDPSDQDD SRRMHPRLSF KAFLEVVKMK SLAWTDSEMD AIHSLQLILR GTVDGVVKPT
0601: GKASLDEQIG DLKLDGLAEL QAVTSEMVRL METATVPILA VDGNGLVNGW NQKAAELTGL RVDDAIGRHI LTLVEESSVS VVQRMLYLAL QGKEEKEVRF
0701: EVKTHGPKRD DGPVILVVNA CASRDLHDDV VGVCFVAQDM TVHKLVMDKF TRVEGDYKAI IHNPNPLIPP IFGADEFGWC CEWNAAMTKL TGWHKEEVLD
0801: KMLLGEVFDS RNASCLLKNK DAFVSLCAVI NSALAGKETE KAPFGFFDRS GKYTECLLSV NRRQNEDGLI TGVFCFIHIP SHELQQALQV QQASEQASLK
0901: RLKAFSYMRH AINNPLSGML YSRKALKNTD LNEEQMRQIH VSDNCHHQLN KILADLDQDS IMEKSSCLDL EMAEFVLQDV VVAAVSQVLI ACEGKGIRVS
1001: CNLPERFMKK LIYGDGVRLQ QILSDFLSIS VKFSPVGGSI EISAKATKNS IGENLHLIDL DLRIKHHGLG VPAELMAQMF EEDDMQQSEE GLGLLVSRNL
1101: LRLMNGDVRH LREAGMSIFI LTAELACGPT AMEH
0101: IAFSENAPEM LTTVSHAVPS VDDPPRLDIG TNVRSLFTDQ GATALHKALG FADVSLLNPI LVQCKSSGKP FYAIVHRATG CLVVDFEPVN PTEFPATAAG
0201: ALQSYKLAAK AISKIQALPG GSMELLCNTV VKEVFELTGY DRVMAYKFHE DNHGEVFAEI TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMICDVRAR
0301: SIKVIEDEAL PFDISLCGSA LRAAHSCHLQ YMENMNSIAS LVMAVVVNEN EEDDEVGSEQ PAQQQKKKIL WGLVVCHHES PRYVPFPLRY ACEFLAQVFA
0401: VHVNKEFEVQ KQLREKSILR MQTILSDMLF KEASPLTIVS GAPNIMDLIK CDGAALLYGG KVWRLGNAPT ESQIRDLALW LSEVHMDSTG LSTESLHDAG
0501: YPGASALGDM VCGMAVAKIN SNDILFWFRS HTAKEIRWGG AKNDPSDQDD SRRMHPRLSF KAFLEVVKMK SLAWTDSEMD AIHSLQLILR GTVDGVVKPT
0601: GKASLDEQIG DLKLDGLAEL QAVTSEMVRL METATVPILA VDGNGLVNGW NQKAAELTGL RVDDAIGRHI LTLVEESSVS VVQRMLYLAL QGKEEKEVRF
0701: EVKTHGPKRD DGPVILVVNA CASRDLHDDV VGVCFVAQDM TVHKLVMDKF TRVEGDYKAI IHNPNPLIPP IFGADEFGWC CEWNAAMTKL TGWHKEEVLD
0801: KMLLGEVFDS RNASCLLKNK DAFVSLCAVI NSALAGKETE KAPFGFFDRS GKYTECLLSV NRRQNEDGLI TGVFCFIHIP SHELQQALQV QQASEQASLK
0901: RLKAFSYMRH AINNPLSGML YSRKALKNTD LNEEQMRQIH VSDNCHHQLN KILADLDQDS IMEKSSCLDL EMAEFVLQDV VVAAVSQVLI ACEGKGIRVS
1001: CNLPERFMKK LIYGDGVRLQ QILSDFLSIS VKFSPVGGSI EISAKATKNS IGENLHLIDL DLRIKHHGLG VPAELMAQMF EEDDMQQSEE GLGLLVSRNL
1101: LRLMNGDVRH LREAGMSIFI LTAELACGPT AMEH
0001: MEKKMSGSRP TQSSEGSRRS RHSARIIAQT TVDAKLHADF EESGSSFDYS TSVRVTGPVV ENQPPRSDKV TTTYLHHIQK GKLIQPFGCL LALDEKTFKV
0101: IAYSENASEL LTMASHAVPS VGEHPVLGIG TDIRSLFTAP SASALQKALG FGDVSLLNPI LVHCRTSAKP FYAIIHRVTG SIIIDFEPVK PYEVPMTAAG
0201: ALQSYKLAAK AITRLQSLPS GSMERLCDTM VQEVFELTGY DRVMAYKFHE DDHGEVVSEV TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMIVDCNAK
0301: HARVLQDEKL SFDLTLCGST LRAPHSCHLQ YMANMDSIAS LVMAVVVNEE DGEGDAPDAT TQPQKRKRLW GLVVCHNTTP RFVPFPLRYA CEFLAQVFAI
0401: HVNKEVELDN QMVEKNILRT QTLLCDMLMR DAPLGIVSQS PNIMDLVKCD GAALLYKDKI WKLGTTPSEF HLQEIASWLC EYHMDSTGLS TDSLHDAGFP
0501: RALSLGDSVC GMAAVRISSK DMIFWFRSHT AGEVRWGGAK HDPDDRDDAR RMHPRSSFKA FLEVVKTRSL PWKDYEMDAI HSLQLILRNA FKDSETTDVN
0601: TKVIYSKLND LKIDGIQELE AVTSEMVRLI ETATVPILAV DSDGLVNGWN TKIAELTGLS VDEAIGKHFL TLVEDSSVEI VKRMLENALE GTEEQNVQFE
0701: IKTHLSRADA GPISLVVNAC ASRDLHENVV GVCFVAHDLT GQKTVMDKFT RIEGDYKAII QNPNPLIPPI FGTDEFGWCT EWNPAMSKLT GLKREEVIDK
0801: MLLGEVFGTQ KSCCRLKNQE AFVNLGIVLN NAVTSQDPEK VSFAFFTRGG KYVECLLCVS KKLDREGVVT GVFCFLQLAS HELQQALHVQ RLAERTAVKR
0901: LKALAYIKRQ IRNPLSGIMF TRKMIEGTEL GPEQRRILQT SALCQKQLSK ILDDSDLESI IEGCLDLEMK EFTLNEVLTA STSQVMMKSN GKSVRITNET
1001: GEEVMSDTLY GDSIRLQQVL ADFMLMAVNF TPSGGQLTVS ASLRKDQLGR SVHLANLEIR LTHTGAGIPE FLLNQMFGTE EDVSEEGLSL MVSRKLVKLM
1101: NGDVQYLRQA GKSSFIITAE LAAANK
0101: IAYSENASEL LTMASHAVPS VGEHPVLGIG TDIRSLFTAP SASALQKALG FGDVSLLNPI LVHCRTSAKP FYAIIHRVTG SIIIDFEPVK PYEVPMTAAG
0201: ALQSYKLAAK AITRLQSLPS GSMERLCDTM VQEVFELTGY DRVMAYKFHE DDHGEVVSEV TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMIVDCNAK
0301: HARVLQDEKL SFDLTLCGST LRAPHSCHLQ YMANMDSIAS LVMAVVVNEE DGEGDAPDAT TQPQKRKRLW GLVVCHNTTP RFVPFPLRYA CEFLAQVFAI
0401: HVNKEVELDN QMVEKNILRT QTLLCDMLMR DAPLGIVSQS PNIMDLVKCD GAALLYKDKI WKLGTTPSEF HLQEIASWLC EYHMDSTGLS TDSLHDAGFP
0501: RALSLGDSVC GMAAVRISSK DMIFWFRSHT AGEVRWGGAK HDPDDRDDAR RMHPRSSFKA FLEVVKTRSL PWKDYEMDAI HSLQLILRNA FKDSETTDVN
0601: TKVIYSKLND LKIDGIQELE AVTSEMVRLI ETATVPILAV DSDGLVNGWN TKIAELTGLS VDEAIGKHFL TLVEDSSVEI VKRMLENALE GTEEQNVQFE
0701: IKTHLSRADA GPISLVVNAC ASRDLHENVV GVCFVAHDLT GQKTVMDKFT RIEGDYKAII QNPNPLIPPI FGTDEFGWCT EWNPAMSKLT GLKREEVIDK
0801: MLLGEVFGTQ KSCCRLKNQE AFVNLGIVLN NAVTSQDPEK VSFAFFTRGG KYVECLLCVS KKLDREGVVT GVFCFLQLAS HELQQALHVQ RLAERTAVKR
0901: LKALAYIKRQ IRNPLSGIMF TRKMIEGTEL GPEQRRILQT SALCQKQLSK ILDDSDLESI IEGCLDLEMK EFTLNEVLTA STSQVMMKSN GKSVRITNET
1001: GEEVMSDTLY GDSIRLQQVL ADFMLMAVNF TPSGGQLTVS ASLRKDQLGR SVHLANLEIR LTHTGAGIPE FLLNQMFGTE EDVSEEGLSL MVSRKLVKLM
1101: NGDVQYLRQA GKSSFIITAE LAAANK
Arabidopsis Description
PHYAphytochrome A [Source:TAIR;Acc:AT1G09570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.