Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90417 | Soybean | nucleus | 88.83 | 94.21 |
| VIT_14s0060g00100.t01 | Wine grape | nucleus | 76.07 | 80.61 |
| KRG96653 | Soybean | nucleus | 74.89 | 78.94 |
| AT1G09570.3 | Thale cress | cytosol | 73.3 | 77.53 |
| CDY06362 | Canola | cytosol, plastid | 72.8 | 77.34 |
| Bra031672.1-P | Field mustard | cytosol, plastid | 72.46 | 76.98 |
| Solyc10g044670.1.1 | Tomato | extracellular | 72.38 | 76.76 |
| CDY22632 | Canola | cytosol, plastid | 72.29 | 76.67 |
| PGSC0003DMT400040772 | Potato | cytosol | 71.62 | 75.96 |
| CDY50896 | Canola | endoplasmic reticulum, plastid, vacuole | 73.8 | 75.71 |
| CDX93501 | Canola | cytosol | 74.31 | 73.63 |
| Bra020013.1-P | Field mustard | cytosol | 73.97 | 72.81 |
| KRH68382 | Soybean | endoplasmic reticulum, plastid, vacuole | 57.01 | 69.71 |
| GSMUA_Achr8P06130_001 | Banana | cytosol, mitochondrion | 61.46 | 68.09 |
| HORVU0Hr1G023250.4 | Barley | cytosol | 19.48 | 66.67 |
| TraesCS4B01G052000.1 | Wheat | mitochondrion | 49.12 | 66.1 |
| HORVU1Hr1G068750.7 | Barley | cytosol | 19.56 | 65.63 |
| GSMUA_Achr5P27310_001 | Banana | cytosol | 8.4 | 64.52 |
| OQU91090 | Sorghum | nucleus | 60.45 | 63.66 |
| Os03t0719800-01 | Rice | plastid | 60.2 | 63.56 |
| Zm00001d013402_P005 | Maize | nucleus | 60.2 | 63.4 |
| Zm00001d033799_P001 | Maize | cytosol | 60.2 | 63.4 |
| HORVU4Hr1G008610.2 | Barley | mitochondrion | 59.78 | 63.01 |
| TraesCS4A01G262900.1 | Wheat | mitochondrion | 59.28 | 62.48 |
| TraesCS4D01G052200.1 | Wheat | plastid | 59.28 | 62.26 |
| Zm00001d008542_P001 | Maize | cytosol | 12.51 | 61.57 |
| OQU91089 | Sorghum | cytosol | 8.56 | 56.98 |
| KRH36969 | Soybean | nucleus | 48.95 | 51.28 |
| KRH11936 | Soybean | nucleus | 49.45 | 51.26 |
| KRH37778 | Soybean | nucleus | 46.26 | 49.2 |
| KRH12820 | Soybean | cytosol | 44.42 | 48.18 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr10:+:37489560..37495624
Molecular Weight (calculated)
132238.0 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.023
Length
1191 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPWWSLVTLT VVVVSLKKTR GGWVPWLLLL PTPLFFILTL SLIASFPLFP LFRFQVQFGV KMSTSRPSQS SSNSRRSRHS ARMAQATVDA KIHATFEESG
0101: SSFDYSSSVR VSGTADGVNQ PRSDKVTTAY LNHMQRGKMI QPFGCLLAID EKTCKVIAYS ENAPEMLTMV SHAVPSVGDH PALGIGTDIK TLFTAPSVSG
0201: LQKALGCADV SLLNPILVHC KTSGKPFYAI VHRVTGSLIV DFEPVKPYEV PMTAAGALQS YKLAAKAITR LQSLPSGNME RLCDTMVQEV FELTGYDRVM
0301: AYKFHEDDHG EVIAEITKPG LEPYLGLHYP ATDIPQASRF LFRKNKVRMI VDCHAKHVRV LQDEKLQFDL ILCGSTLRAP HSCHAQYMAN MDSIASLVLA
0401: VVVNDNEEDG DTDAVQPQKR ERLWGLVVCH NTTPRFVPFP LRYACEFLAQ VFAVHVHKEI ELEYQIIEKN ILRTQALLCM LMRDAPLGIV SESPNIMDLV
0501: KCDGAALIYR NKVWRLGVTP SEPQIREIAL WLSEYHMDST GFSTDSLFDA GFPSALSLGD VVCGMASVRV TAKDMVFWFR SHTAAEIRWG GAKHEAGEKD
0601: DSRRMHPRSS FKAFLEVVKA RSLPWKEYEM DAIHSLQIIL RNAFKEDTES LDLNAKAINT RLSDLKIEGI NDLKIERMQE LEAVTSEIVR LIDTATVPIL
0701: AVDVDGLVNG WNIKIAELTG LPIGEATGKH LLTLVEDSST DRVKKMLNLA LLGEEEKNVQ FEIKTHGSKM DSGPISLVVN ACASRDLRDN VVGVCFVAHD
0801: ITAQKNVMDK FIRIEGDYKA IVQNRNPLIP PIFGTDEFGW CCEWNPAMMK LTGWKREEVM DKMLLGEIFG TQMAACRLKN QEAFVNLGVV LNKAMTGSET
0901: EKVPFGFFAR NGKYVECLLS VSKKLDVEGL VTGVFCFLQL ASPELQQALH IQRLSEQTAS KRLNALSYMK RQIRNPLCGI VFSRKMLEGT DLGTEQKQLL
1001: RTSAQCQQQL SKILDDSDLD TIIDGYLDLE MAEFTLHEVL VTSLSQVMTK SNGKSIRIVN DVAGHIMMET LYGDSLRLQQ VLADFLLISI NFTPNGGQVV
1101: VAGSLTKEQL GKSVHLVKLE LSITHGGSGV PEVLLNQMFG NNGLESEEGI SLLISRKLLK LMNGDVRYLR EAGKSAFILS AELAAAHNLK A
0101: SSFDYSSSVR VSGTADGVNQ PRSDKVTTAY LNHMQRGKMI QPFGCLLAID EKTCKVIAYS ENAPEMLTMV SHAVPSVGDH PALGIGTDIK TLFTAPSVSG
0201: LQKALGCADV SLLNPILVHC KTSGKPFYAI VHRVTGSLIV DFEPVKPYEV PMTAAGALQS YKLAAKAITR LQSLPSGNME RLCDTMVQEV FELTGYDRVM
0301: AYKFHEDDHG EVIAEITKPG LEPYLGLHYP ATDIPQASRF LFRKNKVRMI VDCHAKHVRV LQDEKLQFDL ILCGSTLRAP HSCHAQYMAN MDSIASLVLA
0401: VVVNDNEEDG DTDAVQPQKR ERLWGLVVCH NTTPRFVPFP LRYACEFLAQ VFAVHVHKEI ELEYQIIEKN ILRTQALLCM LMRDAPLGIV SESPNIMDLV
0501: KCDGAALIYR NKVWRLGVTP SEPQIREIAL WLSEYHMDST GFSTDSLFDA GFPSALSLGD VVCGMASVRV TAKDMVFWFR SHTAAEIRWG GAKHEAGEKD
0601: DSRRMHPRSS FKAFLEVVKA RSLPWKEYEM DAIHSLQIIL RNAFKEDTES LDLNAKAINT RLSDLKIEGI NDLKIERMQE LEAVTSEIVR LIDTATVPIL
0701: AVDVDGLVNG WNIKIAELTG LPIGEATGKH LLTLVEDSST DRVKKMLNLA LLGEEEKNVQ FEIKTHGSKM DSGPISLVVN ACASRDLRDN VVGVCFVAHD
0801: ITAQKNVMDK FIRIEGDYKA IVQNRNPLIP PIFGTDEFGW CCEWNPAMMK LTGWKREEVM DKMLLGEIFG TQMAACRLKN QEAFVNLGVV LNKAMTGSET
0901: EKVPFGFFAR NGKYVECLLS VSKKLDVEGL VTGVFCFLQL ASPELQQALH IQRLSEQTAS KRLNALSYMK RQIRNPLCGI VFSRKMLEGT DLGTEQKQLL
1001: RTSAQCQQQL SKILDDSDLD TIIDGYLDLE MAEFTLHEVL VTSLSQVMTK SNGKSIRIVN DVAGHIMMET LYGDSLRLQQ VLADFLLISI NFTPNGGQVV
1101: VAGSLTKEQL GKSVHLVKLE LSITHGGSGV PEVLLNQMFG NNGLESEEGI SLLISRKLLK LMNGDVRYLR EAGKSAFILS AELAAAHNLK A
0001: MEKKMSGSRP TQSSEGSRRS RHSARIIAQT TVDAKLHADF EESGSSFDYS TSVRVTGPVV ENQPPRSDKV TTTYLHHIQK GKLIQPFGCL LALDEKTFKV
0101: IAYSENASEL LTMASHAVPS VGEHPVLGIG TDIRSLFTAP SASALQKALG FGDVSLLNPI LVHCRTSAKP FYAIIHRVTG SIIIDFEPVK PYEVPMTAAG
0201: ALQSYKLAAK AITRLQSLPS GSMERLCDTM VQEVFELTGY DRVMAYKFHE DDHGEVVSEV TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMIVDCNAK
0301: HARVLQDEKL SFDLTLCGST LRAPHSCHLQ YMANMDSIAS LVMAVVVNEE DGEGDAPDAT TQPQKRKRLW GLVVCHNTTP RFVPFPLRYA CEFLAQVFAI
0401: HVNKEVELDN QMVEKNILRT QTLLCDMLMR DAPLGIVSQS PNIMDLVKCD GAALLYKDKI WKLGTTPSEF HLQEIASWLC EYHMDSTGLS TDSLHDAGFP
0501: RALSLGDSVC GMAAVRISSK DMIFWFRSHT AGEVRWGGAK HDPDDRDDAR RMHPRSSFKA FLEVVKTRSL PWKDYEMDAI HSLQLILRNA FKDSETTDVN
0601: TKVIYSKLND LKIDGIQELE AVTSEMVRLI ETATVPILAV DSDGLVNGWN TKIAELTGLS VDEAIGKHFL TLVEDSSVEI VKRMLENALE GTEEQNVQFE
0701: IKTHLSRADA GPISLVVNAC ASRDLHENVV GVCFVAHDLT GQKTVMDKFT RIEGDYKAII QNPNPLIPPI FGTDEFGWCT EWNPAMSKLT GLKREEVIDK
0801: MLLGEVFGTQ KSCCRLKNQE AFVNLGIVLN NAVTSQDPEK VSFAFFTRGG KYVECLLCVS KKLDREGVVT GVFCFLQLAS HELQQALHVQ RLAERTAVKR
0901: LKALAYIKRQ IRNPLSGIMF TRKMIEGTEL GPEQRRILQT SALCQKQLSK ILDDSDLESI IEGCLDLEMK EFTLNEVLTA STSQVMMKSN GKSVRITNET
1001: GEEVMSDTLY GDSIRLQQVL ADFMLMAVNF TPSGGQLTVS ASLRKDQLGR SVHLANLEIR LTHTGAGIPE FLLNQMFGTE EDVSEEGLSL MVSRKLVKLM
1101: NGDVQYLRQA GKSSFIITAE LAAANK
0101: IAYSENASEL LTMASHAVPS VGEHPVLGIG TDIRSLFTAP SASALQKALG FGDVSLLNPI LVHCRTSAKP FYAIIHRVTG SIIIDFEPVK PYEVPMTAAG
0201: ALQSYKLAAK AITRLQSLPS GSMERLCDTM VQEVFELTGY DRVMAYKFHE DDHGEVVSEV TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMIVDCNAK
0301: HARVLQDEKL SFDLTLCGST LRAPHSCHLQ YMANMDSIAS LVMAVVVNEE DGEGDAPDAT TQPQKRKRLW GLVVCHNTTP RFVPFPLRYA CEFLAQVFAI
0401: HVNKEVELDN QMVEKNILRT QTLLCDMLMR DAPLGIVSQS PNIMDLVKCD GAALLYKDKI WKLGTTPSEF HLQEIASWLC EYHMDSTGLS TDSLHDAGFP
0501: RALSLGDSVC GMAAVRISSK DMIFWFRSHT AGEVRWGGAK HDPDDRDDAR RMHPRSSFKA FLEVVKTRSL PWKDYEMDAI HSLQLILRNA FKDSETTDVN
0601: TKVIYSKLND LKIDGIQELE AVTSEMVRLI ETATVPILAV DSDGLVNGWN TKIAELTGLS VDEAIGKHFL TLVEDSSVEI VKRMLENALE GTEEQNVQFE
0701: IKTHLSRADA GPISLVVNAC ASRDLHENVV GVCFVAHDLT GQKTVMDKFT RIEGDYKAII QNPNPLIPPI FGTDEFGWCT EWNPAMSKLT GLKREEVIDK
0801: MLLGEVFGTQ KSCCRLKNQE AFVNLGIVLN NAVTSQDPEK VSFAFFTRGG KYVECLLCVS KKLDREGVVT GVFCFLQLAS HELQQALHVQ RLAERTAVKR
0901: LKALAYIKRQ IRNPLSGIMF TRKMIEGTEL GPEQRRILQT SALCQKQLSK ILDDSDLESI IEGCLDLEMK EFTLNEVLTA STSQVMMKSN GKSVRITNET
1001: GEEVMSDTLY GDSIRLQQVL ADFMLMAVNF TPSGGQLTVS ASLRKDQLGR SVHLANLEIR LTHTGAGIPE FLLNQMFGTE EDVSEEGLSL MVSRKLVKLM
1101: NGDVQYLRQA GKSSFIITAE LAAANK
Arabidopsis Description
PHYAphytochrome A [Source:TAIR;Acc:AT1G09570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.