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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 5
  • cytosol 1
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400040772 Potato cytosol 84.07 84.15
Solyc10g044670.1.1 Tomato extracellular 83.63 83.7
KRG90417 Soybean nucleus 82.3 82.37
AT1G09570.3 Thale cress cytosol 81.49 81.35
CDY22632 Canola cytosol, plastid 80.52 80.59
CDY06362 Canola cytosol, plastid 80.16 80.37
Bra031672.1-P Field mustard cytosol, plastid 80.07 80.29
CDY50896 Canola endoplasmic reticulum, plastid, vacuole 81.41 78.81
KRG96653 Soybean nucleus 78.02 77.61
CDX93501 Canola cytosol 81.67 76.37
KRH33709 Soybean endoplasmic reticulum, golgi, plastid 80.61 76.07
Bra020013.1-P Field mustard cytosol 81.76 75.95
GSMUA_Achr8P06130_001 Banana cytosol, mitochondrion 67.44 70.51
HORVU0Hr1G023250.4 Barley cytosol 21.26 68.68
HORVU1Hr1G068750.7 Barley cytosol 21.53 68.17
TraesCS4B01G052000.1 Wheat mitochondrion 53.11 67.46
KRH68382 Soybean endoplasmic reticulum, plastid, vacuole 58.45 67.45
Os03t0719800-01 Rice plastid 65.84 65.6
OQU91090 Sorghum nucleus 65.48 65.08
Zm00001d013402_P005 Maize nucleus 65.3 64.9
Zm00001d033799_P001 Maize cytosol 65.04 64.63
HORVU4Hr1G008610.2 Barley mitochondrion 64.95 64.6
TraesCS4A01G262900.1 Wheat mitochondrion 64.23 63.89
TraesCS4D01G052200.1 Wheat plastid 64.32 63.76
GSMUA_Achr5P27310_001 Banana cytosol 8.63 62.58
Zm00001d008542_P001 Maize cytosol 13.26 61.57
VIT_12s0057g00980.t01 Wine grape cytosol, plastid 59.34 59.66
OQU91089 Sorghum cytosol 9.25 58.1
VIT_05s0077g00940.t01 Wine grape cytosol 54.09 53.85
VIT_10s0003g02680.t01 Wine grape vacuole 48.4 51.61
Protein Annotations
Gene3D:1.10.287.130EntrezGene:100240824wikigene:100240824MapMan:26.1.1.1Gene3D:3.30.450.20Gene3D:3.30.450.270
Gene3D:3.30.450.40Gene3D:3.30.565.10UniProt:A5B9C2ProteinID:ACC60965ProteinID:ACC60965.1EMBL:AM451152
ProteinID:CAN76586ProteinID:CAN76586.1ProteinID:CBI39690ProteinID:CBI39690.3ncoils:CoilEMBL:EU436649
EMBL:FN596746InterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155GO:GO:0000160GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003729GO:GO:0003824GO:GO:0004672GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005654GO:GO:0005737GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006412
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009584GO:GO:0009585GO:GO:0009605GO:GO:0009606
GO:GO:0009628GO:GO:0009630GO:GO:0009638GO:GO:0009640GO:GO:0009791GO:GO:0009881
GO:GO:0009987GO:GO:0010018GO:GO:0010161GO:GO:0010201GO:GO:0010203GO:GO:0010218
GO:GO:0016301GO:GO:0016604GO:GO:0016740GO:GO:0017006GO:GO:0017148GO:GO:0018298
GO:GO:0019538GO:GO:0023014GO:GO:0031516GO:GO:0038023GO:GO:0042802GO:GO:0042803
GO:GO:0046685GO:GO:0050896InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:His_kinase_dom
InterPro:IPR000014InterPro:IPR000700InterPro:IPR005467InterPro:IPR016132InterPro:IPR029016InterPro:IPR036890
InterPro:PASInterPro:PAS-assoc_CInterPro:PAS-like_dom_sfInterPro:PAS_2InterPro:PAS_foldPFAM:PF00360
PFAM:PF00512PFAM:PF00989PFAM:PF01590PFAM:PF02518PFAM:PF08446EntrezGene:PHYA
wikigene:PHYAPIRSF:PIRSF000084PRINTS:PR01033ScanProsite:PS00245PFscan:PS50046PFscan:PS50109
PFscan:PS50112PFscan:PS50113PANTHER:PTHR43719PANTHER:PTHR43719:SF13InterPro:Phyto_chromo_BSInterPro:Phyto_chromo_attachment
InterPro:PhytochromeInterPro:Phytochrome_A-EInterPro:Phytochrome_cen-regSMART:SM00065SMART:SM00091SMART:SM00387
SMART:SM00388SUPFAM:SSF55781SUPFAM:SSF55785SUPFAM:SSF55874TIGR:TC66608TIGRFAMs:TIGR00229
UniParc:UPI00015206BBArrayExpress:VIT_14s0060g00100EnsemblPlantsGene:VIT_14s0060g00100EnsemblPlants:VIT_14s0060g00100.t01unigene:Vvi.9631RefSeq:XP_002278610
RefSeq:XP_002278610.1RefSeq:XP_010659783.1SEG:seg:::
Description
Phytochrome [Source:UniProtKB/TrEMBL;Acc:A5B9C2]
Coordinates
chr14:+:115059..121638
Molecular Weight (calculated)
124354.0 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.131
Length
1124 amino acids
Sequence
(BLAST)
0001: MSSSRPTQSS STSGRSKHSA RIIAQTTVDA KLHADFEESG SSFDYSSSVR FTPAGGDQQP RSDKVTTAYL HHIQKGKLIQ PFGSLLALDE KTFKVIAYSE
0101: NAPEMLTMVS HAVPSVGEHP VLGIGTDVRT IFSGPSASAL HKALGFGEVS LLNPILVHCK TSGKPFYAII HRVTGSLIID FEPVKPYEVP MTAAGALQSY
0201: KLAAKAITRL QSLPSGSLER LCDTMVQEVF ELTGYDRVMA YKFHDDDHGE VVSEITKPGL EPYLGLHYPA TDIPQAARFL FMKNKVRMIC DCRAKHIQVL
0301: QDEKLPFDLT LCGSTLRAPH SCHVQYMENM NSIASLVMAV VVNDGDEEGE SSNSGQPQKR KRLWGLVVCH HTTPRFVPFP LRYACEFLAQ VFAIHVNKEL
0401: ELESQILEKN ILRTQTLLCD MLMRDAPLGI VSQSPNVMDL VKCDGAALLY KNKVWRLGIT PSDFQLHDIC SWLSEYHMDS TGLSTDSLYD AGYPGALALG
0501: DAVCGMAAVK ITSKDTLFWF RSHTAAEVRW GGAKHEPGEK DDGRKMHPRS SFKAFLEVVK TRSLPWKDYE MDAIHSLQLI LRNAFKDSEA MDVNTNAIHT
0601: KLNDLKIEGM QELEAVTSEM VRLIETASVP ILAVDVDGLV NGWNTKISEL TSLPVDKAIG MHLLTLVEDS SADTVKKMLH LALQGQEEQN VQFEIKTHGS
0701: KRDSGPISLV VNACASRDLH ENVVGVCFVA QDITSQKTVM DKFTRIEGDY KAIVQNPNPL IPPIFGTDEF GWCSEWNPAM VKLSGWNREE VMDKMLLGEV
0801: FGTHMACCRL KNREAFVGLG IVLNSVMTGR ESEKVSFGFF SKSGKYVECL LSVSKKLDRE GAVTGVFCFL QLASQELQQA LHIQRLSEQT ALKRLKALAY
0901: IKRQIKNPLS GIIFSRKMME DTDLGEEQQQ ILHTSAQCQR QLSKILDDHD LDSIIEGYLD LEMVEFTLRE VLVASISQVM IKSNGKGIQI VNDAEEGIMT
1001: ETLYGDGLRL QQVLADFLLI SVNFTPGGGQ LSVAASLIKD RLGESVHLVH LELRITHAGN GVPEQLLNQM FGNNGDASEE GISLLISRKL VKLMNGDVQY
1101: LREAGKSTFI ISIELAAARK KPQA
Best Arabidopsis Sequence Match ( AT1G09570.3 )
(BLAST)
0001: MEKKMSGSRP TQSSEGSRRS RHSARIIAQT TVDAKLHADF EESGSSFDYS TSVRVTGPVV ENQPPRSDKV TTTYLHHIQK GKLIQPFGCL LALDEKTFKV
0101: IAYSENASEL LTMASHAVPS VGEHPVLGIG TDIRSLFTAP SASALQKALG FGDVSLLNPI LVHCRTSAKP FYAIIHRVTG SIIIDFEPVK PYEVPMTAAG
0201: ALQSYKLAAK AITRLQSLPS GSMERLCDTM VQEVFELTGY DRVMAYKFHE DDHGEVVSEV TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMIVDCNAK
0301: HARVLQDEKL SFDLTLCGST LRAPHSCHLQ YMANMDSIAS LVMAVVVNEE DGEGDAPDAT TQPQKRKRLW GLVVCHNTTP RFVPFPLRYA CEFLAQVFAI
0401: HVNKEVELDN QMVEKNILRT QTLLCDMLMR DAPLGIVSQS PNIMDLVKCD GAALLYKDKI WKLGTTPSEF HLQEIASWLC EYHMDSTGLS TDSLHDAGFP
0501: RALSLGDSVC GMAAVRISSK DMIFWFRSHT AGEVRWGGAK HDPDDRDDAR RMHPRSSFKA FLEVVKTRSL PWKDYEMDAI HSLQLILRNA FKDSETTDVN
0601: TKVIYSKLND LKIDGIQELE AVTSEMVRLI ETATVPILAV DSDGLVNGWN TKIAELTGLS VDEAIGKHFL TLVEDSSVEI VKRMLENALE GTEEQNVQFE
0701: IKTHLSRADA GPISLVVNAC ASRDLHENVV GVCFVAHDLT GQKTVMDKFT RIEGDYKAII QNPNPLIPPI FGTDEFGWCT EWNPAMSKLT GLKREEVIDK
0801: MLLGEVFGTQ KSCCRLKNQE AFVNLGIVLN NAVTSQDPEK VSFAFFTRGG KYVECLLCVS KKLDREGVVT GVFCFLQLAS HELQQALHVQ RLAERTAVKR
0901: LKALAYIKRQ IRNPLSGIMF TRKMIEGTEL GPEQRRILQT SALCQKQLSK ILDDSDLESI IEGCLDLEMK EFTLNEVLTA STSQVMMKSN GKSVRITNET
1001: GEEVMSDTLY GDSIRLQQVL ADFMLMAVNF TPSGGQLTVS ASLRKDQLGR SVHLANLEIR LTHTGAGIPE FLLNQMFGTE EDVSEEGLSL MVSRKLVKLM
1101: NGDVQYLRQA GKSSFIITAE LAAANK
Arabidopsis Description
PHYAphytochrome A [Source:TAIR;Acc:AT1G09570]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.