CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12186	Soybean	cytosol, golgi, nucleus	91.47	73.29
CDY72372	Canola	cytosol, extracellular	12.53	61.84
PGSC0003DMT400051484	Potato	cytosol, extracellular, nucleus	34.13	52.24
VIT_05s0020g00870.t01	Wine grape	cytosol, mitochondrion, peroxisome	62.13	50.11
Bra040299.1-P	Field mustard	cytosol, nucleus, peroxisome	53.07	42.52
AT3G06960.1	Thale cress	cytosol	54.13	42.38
Os01t0251000-01	Rice	plastid	46.4	37.58
TraesCS3A01G164900.1	Wheat	cytosol	45.6	36.93
TraesCS3B01G200800.3	Wheat	cytosol	45.6	36.93
TraesCS3D01G176700.1	Wheat	cytosol	45.6	36.93
OQU86609	Sorghum	cytosol	44.27	36.17
GSMUA_Achr8P10930_001	Banana	cytosol	45.33	35.42
Zm00001d040259_P001	Maize	cytosol, extracellular, nucleus	44.27	34.3
HORVU3Hr1G034170.2	Barley	cytosol	45.87	34.13
KRH66391	Soybean	nucleus	34.4	27.8
KRH48903	Soybean	cytosol	33.87	26.46
PGSC0003DMT400051483	Potato	endoplasmic reticulum, mitochondrion, nucleus	12.0	25.71
Solyc01g057020.2.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus	11.73	25.14

Protein Annotations

EMBL:ACUP02005429	EMBL:ACUP02005430	EnsemblPlants:KRH37207	EnsemblPlantsGene:GLYMA_09G051500	PANTHER:PTHR34954	PANTHER:PTHR34954:SF1
ProteinID:KRH37207	ProteinID:KRH37207.1	SEG:seg	UniParc:UPI00023CB4AD	UniProt:A0A0R0I433	MapMan:5.8.2.3

Description

hypothetical protein

Coordinates

chr9:-:4487805..4492811

Molecular Weight (calculated)

41681.3 Da

IEP (calculated)

9.322

GRAVY (calculated)

-0.184

Length

375 amino acids

Sequence
(BLAST)

001: LVFLLGQFHL QRFVSSVKSS KEKPKELSSW LKTFGRHLQQ KSLYALGISS EFQLGVDDTL HFGLDAYEDT EKPRGKAVFH HKFPDHDLKV EAVYPGHFVD
101: TTSNYWDVPF SVAVDLASVT TSDSSTAYHL SAHYTSGSPK QFENIQNQND RVPPPTLLPG LAFKSVFSYR KKVDIWRSEA KKLKLVQPYD IFLSNPHVSA
201: SGIIGAAATT AFGDNSARAQ VEDGSPGFFL QASGIKSSFL ADIFASVSFT AQHGNFQRLF LDLTRFQARL DFPSGFKFLS AATGRTHLLN SQNPAIQTIL
301: PNATLSLQQQ IVGPVSFRVD SGITVDLKNP DRPIHAPEPV FALEYALKVL GSAKAVAWYF PKRQEFVAEL RFFET

Best Arabidopsis Sequence Match ( AT3G06960.1 )
(BLAST)

001: MNRMRWVGEG DIWDLDMSTP VTLEGTARAV PDDPLPLGLS RGTRLSRPKQ VEFFHRFMAS PLIPSFSPIR PNTGDGGGGG FSLQRVLTLP FSNNWLVSLL
101: GQFDVQRFVT EIDKTKAFGR GSSSTVASRL NTIGKHLKDK SLYALGFCSE FLLSPDDTLL LSYDAYKGDL DKNPRAKAIF NHEFPLHNLT AEAVWPGLFV
201: DKHGEYWDVP LSMAIDLASL PAESGPSYHL CLHHNSGSPK KLHSDTMEVP PPSLLPGLSL KSAVSYRTNM DLWRGTTPKL ETCKPYDVFL SSPHVAVSGI
301: IGSVMTAAFG ENSIRSKFEN DSEGVGGFSL HFPSVNSGFM ADALGRASLT AQYGNFQKFF FDLTRFHARL DFPHGLRFLT GATSVAQDLL NSRQPSLEAF
401: QKICPEVLVS LQQQIVGPFS FKVESGIEID LRNGANPVTV DKTVFAIEYA LQVLLSAKAV VSYSPKQNEF MVELRFFET

Arabidopsis Description

TGD4Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M903]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.