Factsheet for HORVU3Hr1G034170.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G164900.1	Wheat	cytosol	89.68	97.62
TraesCS3D01G176700.1	Wheat	cytosol	89.48	97.41
TraesCS3B01G200800.3	Wheat	cytosol	88.29	96.11
Os01t0251000-01	Rice	plastid	79.37	86.39
OQU86609	Sorghum	cytosol	70.83	77.78
Zm00001d040259_P001	Maize	cytosol, extracellular, nucleus	73.81	76.86
GSMUA_Achr8P10930_001	Banana	cytosol	57.94	60.83
CDY72372	Canola	cytosol, extracellular	8.93	59.21
VIT_05s0020g00870.t01	Wine grape	cytosol, mitochondrion, peroxisome	50.2	54.41
PGSC0003DMT400051484	Potato	cytosol, extracellular, nucleus	23.81	48.98
Solyc01g057040.2.1	Tomato	plastid	29.76	48.23
KRH12186	Soybean	cytosol, golgi, nucleus	44.64	48.08
AT3G06960.1	Thale cress	cytosol	43.85	46.14
KRH37207	Soybean	mitochondrion	34.13	45.87
Bra040299.1-P	Field mustard	cytosol, nucleus, peroxisome	41.87	45.09
PGSC0003DMT400051483	Potato	endoplasmic reticulum, mitochondrion, nucleus	14.88	42.86
Solyc01g057020.2.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus	14.09	40.57

Protein Annotations

MapMan:5.8.2.3	UniProt:A0A287KQB3	InterPro:DUF3769	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810
GO:GO:0008150	GO:GO:0008289	GO:GO:0009507	GO:GO:0009536	GO:GO:0009707	GO:GO:0009941
GO:GO:0016020	GO:GO:0034196	GO:GO:0042803	GO:GO:0070300	GO:GO:1990052	EnsemblPlantsGene:HORVU3Hr1G034170
EnsemblPlants:HORVU3Hr1G034170.2	PFAM:PF12600	PANTHER:PTHR34954	PANTHER:PTHR34954:SF1	UniParc:UPI000B470C59	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:184924033..184933781

Molecular Weight (calculated)

56054.2 Da

IEP (calculated)

9.396

GRAVY (calculated)

-0.220

Length

504 amino acids

Sequence
(BLAST)

001: PAWPPILGTH RNSCNTPTQH KAKEQPEKKA KRRPAKAASA AMLRQMRWLT DREGRWELDV ESPATMEGTA RPVPGDPLPL GLSRGPRVTR TKQLDFFHRF
101: MASPLVPSFS ASRAGLSFHH AHLLHLAHNW SCTILEQLHV QKLVAAVKEK LSNRQEGIPW SNDLKRHLHD VISLGVGTEL LITPDTALLL ELYNINKGDR
201: GKAIIHHKLP QQNLTLAASW PGLFVDKQGV YWDVPLSLSA DLASVGSSSG LSYHLLLQQN SGEPKCFGGD ETSDVPLALL PGLCAKAAIS IKKSIDAWRK
301: KEDKLKMVQP YDAFLSDPHV SFTGIVGAVA SGSLGDCSKR ILVPDETRKS NAFRVFHERN KFAAFADLFA SVTFTAQHGN FQRLFLDLTR VSTRLDISSG
401: SLFLRGASRL AQDFFFSRRP DLETFCDVCP DVIVSLQQQI VGPFSFRVES SVAIDPRNQD HFVRVDDSVF AIDWALKVLG SAKATAWYSP KHQEAMVELR
501: FFEV

Best Arabidopsis Sequence Match ( AT3G06960.1 )
(BLAST)

001: MNRMRWVGEG DIWDLDMSTP VTLEGTARAV PDDPLPLGLS RGTRLSRPKQ VEFFHRFMAS PLIPSFSPIR PNTGDGGGGG FSLQRVLTLP FSNNWLVSLL
101: GQFDVQRFVT EIDKTKAFGR GSSSTVASRL NTIGKHLKDK SLYALGFCSE FLLSPDDTLL LSYDAYKGDL DKNPRAKAIF NHEFPLHNLT AEAVWPGLFV
201: DKHGEYWDVP LSMAIDLASL PAESGPSYHL CLHHNSGSPK KLHSDTMEVP PPSLLPGLSL KSAVSYRTNM DLWRGTTPKL ETCKPYDVFL SSPHVAVSGI
301: IGSVMTAAFG ENSIRSKFEN DSEGVGGFSL HFPSVNSGFM ADALGRASLT AQYGNFQKFF FDLTRFHARL DFPHGLRFLT GATSVAQDLL NSRQPSLEAF
401: QKICPEVLVS LQQQIVGPFS FKVESGIEID LRNGANPVTV DKTVFAIEYA LQVLLSAKAV VSYSPKQNEF MVELRFFET

Arabidopsis Description

TGD4Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M903]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.