Factsheet for GSMUA_Achr8P10930_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G200800.3	Wheat	cytosol	61.04	63.28
TraesCS3D01G176700.1	Wheat	cytosol	60.83	63.07
TraesCS3A01G164900.1	Wheat	cytosol	60.83	63.07
Os01t0251000-01	Rice	plastid	60.62	62.85
Zm00001d040259_P001	Maize	cytosol, extracellular, nucleus	59.17	58.68
OQU86609	Sorghum	cytosol	56.04	58.61
HORVU3Hr1G034170.2	Barley	cytosol	60.83	57.94
CDY72372	Canola	cytosol, extracellular	8.96	56.58
PGSC0003DMT400051484	Potato	cytosol, extracellular, nucleus	28.12	55.1
VIT_05s0020g00870.t01	Wine grape	cytosol, mitochondrion, peroxisome	53.33	55.05
Solyc01g057040.2.1	Tomato	plastid	34.17	52.73
KRH12186	Soybean	cytosol, golgi, nucleus	47.5	48.72
AT3G06960.1	Thale cress	cytosol	48.54	48.64
Bra040299.1-P	Field mustard	cytosol, nucleus, peroxisome	46.04	47.22
KRH37207	Soybean	mitochondrion	35.42	45.33
PGSC0003DMT400051483	Potato	endoplasmic reticulum, mitochondrion, nucleus	14.17	38.86
Solyc01g057020.2.1	Tomato	endoplasmic reticulum, mitochondrion, nucleus	13.75	37.71
GSMUA_Achr1P24040_001	Banana	cytosol	35.83	37.31

Protein Annotations

MapMan:5.8.2.3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0008289
GO:GO:0009507	GO:GO:0009536	GO:GO:0009707	GO:GO:0009941	GO:GO:0016020	GO:GO:0034196
GO:GO:0042803	GO:GO:0070300	GO:GO:1990052	EnsemblPlantsGene:GSMUA_Achr8G10930_001	EnsemblPlants:GSMUA_Achr8P10930_001	EnsemblPlants:GSMUA_Achr8T10930_001
UniProt:M0TPE6	PANTHER:PTHR34954	PANTHER:PTHR34954:SF1	UniParc:UPI0002959675	SEG:seg	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G10930_001]

Coordinates

chr8:-:7836381..7842554

Molecular Weight (calculated)

53733.5 Da

IEP (calculated)

8.485

GRAVY (calculated)

-0.152

Length

480 amino acids

Sequence
(BLAST)

001: MGRLRWAEEG CGRWELDMEA PVTMEGTARA VPGDPLPLGL SRGRRITRPK QLDFMHRFMS SPLVPSFAGD PANGGQGLLL HHAHTVHLTE NWSTTIMDQL
101: DVQKISLLFK EFASNHGKEI SWPKIIFKHL LDIFSWGLGT EFLFTQNSSF LVEMYNVKKG NRGKAIFQQK ARYNFSSTCL LWMQLPHHNL TLETAWPGLF
201: VDNNGTYWDV PLSLAVDLAS ISSSSGLSYH LCLQHNSGKP KHFGGDQTTQ VPPSLLPGLC ARAAASIKEN WSIWRKKEGK LRMVQPYDVF LSDPHITASG
301: VLGAVASASL GDCSARLPIE DGLERCKAFR LYARKNNLAV FADLFASVSC TAQHGNFQRL FLDLTRFNAR LDFPSGSAFL TGVAHLSQDL YNSRQLNLEA
401: ICAVCPELTV SLQQQIAGPF SFRVDSRILF DPKDRYHIAR LDESIFAIDW ALKVLGSAKA TAWYSPKHRE AMVELRFFES

Best Arabidopsis Sequence Match ( AT3G06960.1 )
(BLAST)

001: MNRMRWVGEG DIWDLDMSTP VTLEGTARAV PDDPLPLGLS RGTRLSRPKQ VEFFHRFMAS PLIPSFSPIR PNTGDGGGGG FSLQRVLTLP FSNNWLVSLL
101: GQFDVQRFVT EIDKTKAFGR GSSSTVASRL NTIGKHLKDK SLYALGFCSE FLLSPDDTLL LSYDAYKGDL DKNPRAKAIF NHEFPLHNLT AEAVWPGLFV
201: DKHGEYWDVP LSMAIDLASL PAESGPSYHL CLHHNSGSPK KLHSDTMEVP PPSLLPGLSL KSAVSYRTNM DLWRGTTPKL ETCKPYDVFL SSPHVAVSGI
301: IGSVMTAAFG ENSIRSKFEN DSEGVGGFSL HFPSVNSGFM ADALGRASLT AQYGNFQKFF FDLTRFHARL DFPHGLRFLT GATSVAQDLL NSRQPSLEAF
401: QKICPEVLVS LQQQIVGPFS FKVESGIEID LRNGANPVTV DKTVFAIEYA LQVLLSAKAV VSYSPKQNEF MVELRFFET

Arabidopsis Description

TGD4Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M903]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.