Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH59490 | Soybean | nucleus | 95.81 | 95.81 |
VIT_07s0031g01940.t01 | Wine grape | nucleus | 69.3 | 70.28 |
GSMUA_Achr3P26480_001 | Banana | nucleus | 59.07 | 60.48 |
GSMUA_Achr8P04040_001 | Banana | nucleus | 58.6 | 59.72 |
GSMUA_Achr2P08370_001 | Banana | nucleus | 56.28 | 57.35 |
GSMUA_Achr1P14490_001 | Banana | nucleus | 56.28 | 57.08 |
Os01t0589500-01 | Rice | nucleus | 50.7 | 54.5 |
KRH08644 | Soybean | nucleus | 51.16 | 53.92 |
EES03193 | Sorghum | nucleus | 50.7 | 53.69 |
KRH70259 | Soybean | nucleus | 50.7 | 53.17 |
TraesCS3D01G214300.1 | Wheat | nucleus | 48.37 | 52.0 |
TraesCS3B01G242000.1 | Wheat | nucleus | 48.37 | 52.0 |
Os09t0360400-01 | Rice | nucleus | 46.05 | 50.51 |
HORVU5Hr1G056860.2 | Barley | nucleus | 45.58 | 50.26 |
TraesCS5B01G187800.1 | Wheat | nucleus | 45.58 | 50.26 |
Zm00001d044332_P001 | Maize | nucleus | 46.98 | 50.25 |
TraesCS5A01G195600.1 | Wheat | nucleus | 45.12 | 49.74 |
TraesCS5D01G195400.1 | Wheat | nucleus | 45.12 | 49.74 |
EER96625 | Sorghum | nucleus | 44.19 | 48.72 |
Zm00001d005645_P001 | Maize | nucleus | 43.72 | 48.21 |
Zm00001d020205_P001 | Maize | nucleus | 43.72 | 48.21 |
TraesCS3A01G211600.1 | Wheat | nucleus | 48.37 | 47.71 |
GSMUA_Achr6P35970_001 | Banana | nucleus | 46.05 | 46.7 |
KRH35097 | Soybean | nucleus | 48.84 | 46.67 |
GSMUA_AchrUn_... | Banana | nucleus | 41.4 | 43.0 |
HORVU3Hr1G051220.5 | Barley | cytosol, nucleus | 47.44 | 41.8 |
KRG91702 | Soybean | cytosol, nucleus | 31.16 | 40.12 |
Os08t0397900-01 | Rice | plasma membrane | 39.07 | 40.0 |
Protein Annotations
EMBL:ACUP02004851 | EMBL:BT092415 | EnsemblPlants:KRH43349 | EnsemblPlantsGene:GLYMA_08G144000 | EntrezGene:100527566 | InterPro:UCP009193 |
PANTHER:PTHR33675 | PANTHER:PTHR33675:SF3 | PIRSF:PIRSF009193 | ProteinID:KRH43348.1 | ProteinID:KRH43349 | ProteinID:KRH43349.1 |
ProteinID:KRH43350.1 | UniParc:UPI0001B14DE3 | UniProt:C6T4Q4 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr8:+:10980612..10988825
Molecular Weight (calculated)
23790.5 Da
IEP (calculated)
7.693
GRAVY (calculated)
-0.823
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKRKSVAT RLDEVDRTMY STFCSTANSL SHLYTHAMNQ QKLSFQAGER HALEKLYQWI LRQQQEGSRV ATIDIVTHLQ NELEYGGEEA PVSPRQPMHQ
101: QNSQTAMHNT NFGASIPSNA FGATVAGQGI RAGQPDQQPK NSVFSNALSS PIRRSLQPYH LAQGSFPSCN IMSSGNGTRN SDMTYPNGQN RDTNSSNSSD
201: CMDMHSDSPG HDFSY
101: QNSQTAMHNT NFGASIPSNA FGATVAGQGI RAGQPDQQPK NSVFSNALSS PIRRSLQPYH LAQGSFPSCN IMSSGNGTRN SDMTYPNGQN RDTNSSNSSD
201: CMDMHSDSPG HDFSY
001: MGKKRKSEAT RLDEVDRTMY GAFRGAANSL SQLYTHAMNH QRVSFLAGER RGMEKLYQWI VRQEEQGTRV STADITTYLQ NALEYEPEET SIPLPMQEFY
101: QHQFAPPNVN TSVAHVPSSH IAQQQHYDCN QEKLLIPPNG LSSPVRRTLQ DFNLCEAESG NNNYNPNSTG EHLSY
101: QHQFAPPNVN TSVAHVPSSH IAQQQHYDCN QEKLLIPPNG LSSPVRRTLQ DFNLCEAESG NNNYNPNSTG EHLSY
Arabidopsis Description
Holocarboxylase synthetase [Source:UniProtKB/TrEMBL;Acc:Q9FGF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.