Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43349 | Soybean | nucleus | 95.81 | 95.81 |
| VIT_07s0031g01940.t01 | Wine grape | nucleus | 67.44 | 68.4 |
| GSMUA_Achr3P26480_001 | Banana | nucleus | 58.14 | 59.52 |
| GSMUA_Achr8P04040_001 | Banana | nucleus | 58.14 | 59.24 |
| GSMUA_Achr2P08370_001 | Banana | nucleus | 55.35 | 56.4 |
| GSMUA_Achr1P14490_001 | Banana | nucleus | 55.35 | 56.13 |
| Os01t0589500-01 | Rice | nucleus | 50.23 | 54.0 |
| EES03193 | Sorghum | nucleus | 49.77 | 52.71 |
| KRH08644 | Soybean | nucleus | 49.77 | 52.45 |
| KRH70259 | Soybean | nucleus | 49.3 | 51.71 |
| TraesCS3D01G214300.1 | Wheat | nucleus | 47.91 | 51.5 |
| TraesCS3B01G242000.1 | Wheat | nucleus | 47.91 | 51.5 |
| TraesCS5D01G195400.1 | Wheat | nucleus | 45.58 | 50.26 |
| TraesCS5A01G195600.1 | Wheat | nucleus | 45.58 | 50.26 |
| Os09t0360400-01 | Rice | nucleus | 45.58 | 50.0 |
| Zm00001d044332_P001 | Maize | nucleus | 46.51 | 49.75 |
| TraesCS5B01G187800.1 | Wheat | nucleus | 45.12 | 49.74 |
| HORVU5Hr1G056860.2 | Barley | nucleus | 45.12 | 49.74 |
| EER96625 | Sorghum | nucleus | 44.19 | 48.72 |
| Zm00001d005645_P001 | Maize | nucleus | 43.72 | 48.21 |
| Zm00001d020205_P001 | Maize | nucleus | 43.72 | 48.21 |
| TraesCS3A01G211600.1 | Wheat | nucleus | 47.91 | 47.25 |
| GSMUA_Achr6P35970_001 | Banana | nucleus | 45.58 | 46.23 |
| KRH35097 | Soybean | nucleus | 46.98 | 44.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.4 | 43.0 |
| HORVU3Hr1G051220.5 | Barley | cytosol, nucleus | 46.98 | 41.39 |
| Os08t0397900-01 | Rice | plasma membrane | 38.6 | 39.52 |
| KRG91702 | Soybean | cytosol, nucleus | 29.3 | 37.72 |
Protein Annotations
| EMBL:ACUP02003325 | EnsemblPlants:KRH59490 | EnsemblPlantsGene:GLYMA_05G185900 | EntrezGene:100815955 | InterPro:UCP009193 | PANTHER:PTHR33675 |
| PANTHER:PTHR33675:SF3 | PIRSF:PIRSF009193 | ProteinID:KRH59490 | ProteinID:KRH59490.1 | ProteinID:KRH59491.1 | UniParc:UPI000233A0F2 |
| UniProt:I1K4T6 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:37268351..37270438
Molecular Weight (calculated)
23827.5 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.830
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKRRSVAT RLDEVDRTMY STFCSTANSL SHLYTHAMNQ QKLSFQAGER HALEKLYQWI LRQQRDGSRL TTIDIVTHLQ NELEYAGEEA PVSPRQPMHQ
101: QNSHTAMHNT NFGASIPSNA FGATVAGQGI RAGQPDQQPK NSVFSNALSS PIRRSLQPYH LAQGSFPSGN IMSSGNGTRN SDMTYANGQN RDTNSSNSSD
201: CMDMHSDSPG HDFSY
101: QNSHTAMHNT NFGASIPSNA FGATVAGQGI RAGQPDQQPK NSVFSNALSS PIRRSLQPYH LAQGSFPSGN IMSSGNGTRN SDMTYANGQN RDTNSSNSSD
201: CMDMHSDSPG HDFSY
001: MGKKRKSTAT SLDEVDRTVY ASFRTAANSL SQLYTQSMNH QKLSFQAGER HGLEKLYQWI WRQQEGGSRV TPMDIVNYIQ NELECCIDEP PISPRAPPPQ
101: PTMHVTNPGL MTTSGTSFPT AVPVVRSEQC ENQAKNSVFS NALSSPIRRS LQNYQIPQGG YTSGGTTRSS EVNRGSNSPG SIDSSMDMHA E
101: PTMHVTNPGL MTTSGTSFPT AVPVVRSEQC ENQAKNSVFS NALSSPIRRS LQNYQIPQGG YTSGGTTRSS EVNRGSNSPG SIDSSMDMHA E
Arabidopsis Description
Nuclear receptor family 2 group C protein [Source:UniProtKB/TrEMBL;Acc:Q9SZ98]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.