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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH47145 Soybean cytosol 87.61 92.52
PGSC0003DMT400018952 Potato nucleus 62.39 63.23
Solyc11g065900.1.1 Tomato nucleus 61.95 62.78
VIT_05s0077g00800.t01 Wine grape nucleus 60.18 61.82
CDX85387 Canola nucleus 57.52 59.36
Bra037442.1-P Field mustard nucleus 57.08 58.9
CDX86259 Canola nucleus 57.08 58.9
GSMUA_Achr5P21600_001 Banana cytosol 56.64 58.72
AT5G49010.1 Thale cress cytosol 57.08 58.64
EES18994 Sorghum nucleus 55.75 58.6
HORVU3Hr1G090890.3 Barley nucleus 40.71 58.6
VIT_05s0077g00120.t01 Wine grape cytosol 46.46 57.69
Os05t0143400-01 Rice nucleus 55.75 57.27
TraesCS3A01G405500.1 Wheat cytosol 54.87 57.14
TraesCS3D01G400700.1 Wheat cytosol 54.87 57.14
TraesCS3B01G439200.1 Wheat cytosol 54.42 56.68
Zm00001d006788_P001 Maize nucleus 44.69 52.88
VIT_05s0077g00290.t01 Wine grape cytosol 20.35 47.42
Zm00001d024805_P001 Maize cytosol 23.45 41.09
Zm00001d010541_P001 Maize cytosol 25.66 37.42
Protein Annotations
Gene3D:1.20.58.1030EntrezGene:100784291MapMan:13.2.2.5.4EMBL:ACUP02004908ncoils:CoilInterPro:GINS_A
InterPro:GINS_Sld5InterPro:GINS_bundle-like_dom_sfEnsemblPlantsGene:GLYMA_08G194400GO:GO:0000727GO:GO:0000811GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005654
GO:GO:0006139GO:GO:0006259GO:GO:0006260GO:GO:0006261GO:GO:0006270GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0031298GO:GO:0032508GO:GO:0043138UniProt:I1KUV6EnsemblPlants:KRH44169ProteinID:KRH44169
ProteinID:KRH44169.1PFAM:PF05916PFAM:PF16922PIRSF:PIRSF007764PANTHER:PTHR21206InterPro:SLD5_C
SUPFAM:SSF158573SUPFAM:SSF160059InterPro:Sld5_GINS_AUniParc:UPI0002338B1F::
Description
hypothetical protein
Coordinates
chr8:-:15651142..15654743
Molecular Weight (calculated)
26144.4 Da
IEP (calculated)
4.667
GRAVY (calculated)
-0.450
Length
226 amino acids
Sequence
(BLAST)
001: MASSSAAEGV SMDDDYETLI ATTDVELLKR AWRNEKAAPE ILRYESKLVS RVNKVIQLME EIVEEKSSGG TDPLSVSLYQ MDLDRTLFLL RSYLRIRIQK
101: IEKYVFHIQK TEELRNRLSK YEKDFAKMCE NDLEQHLDES VLSKLPKDYK SVLRQSSMSE EDDMVPEPQL DTFVLCRSKE YLTGIQLEDG PVDDRSKLFE
201: MEPGVLHFIC YKSIKALVES GKIDLL
Best Arabidopsis Sequence Match ( AT5G49010.1 )
(BLAST)
001: MASNSEAGGS ADYETLMSTS DVELLKRAWR NEKAAPEILQ YEGALVDRAK EQIELVEETI EDYVENGIDP LVVSLYQMDL DRAQFLLRSY LRVRLLKIEK
101: FMFHNLNSEE AERRLSEQEK VFATRCADDL AKHFEETVLL KLPENYQSVL KQSLISEVDD MVPQPHLDTF VVCRSKNFVS LNLYEEGESP ETVEMERGDL
201: YFIRYKIVKR AIESGQIDLI
Arabidopsis Description
SLD5DNA replication complex GINS protein SLD5 [Source:UniProtKB/TrEMBL;Acc:A0A178UAX9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.