Factsheet for Os01t0614700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01071	Sorghum	cytosol	76.45	82.29
Zm00001d044470_P006	Maize	cytosol, nucleus, peroxisome	75.81	81.31
TraesCS3D01G232100.1	Wheat	cytosol	79.35	80.13
TraesCS3A01G220500.1	Wheat	cytosol	79.03	79.8
Solyc07g053310.2.1	Tomato	cytosol	60.65	66.43
VIT_12s0028g02380.t01	Wine grape	nucleus	60.97	65.85
PGSC0003DMT400052626	Potato	nucleus	59.68	65.37
KRH27034	Soybean	nucleus	59.03	63.54
KRH22295	Soybean	nucleus	58.06	62.94
AT3G58600.1	Thale cress	nucleus	58.06	59.6
CDY00574	Canola	nucleus	56.13	58.98
CDX88994	Canola	nucleus	55.81	58.64
Bra014563.1-P	Field mustard	nucleus	55.81	58.64
TraesCS3B01G250800.1	Wheat	nucleus	77.1	55.2
HORVU3Hr1G054050.3	Barley	plastid	71.94	53.22
CDY49234	Canola	nucleus	40.0	51.45
GSMUA_Achr6P21420_001	Banana	nucleus	32.26	49.75
Os10t0476000-01	Rice	cytosol	29.35	31.71

Protein Annotations

Gene3D:2.30.29.30	MapMan:35.1	EntrezGene:4326643	EMBL:AK106098	ProteinID:BAD61234.1	ProteinID:BAS73148.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0016020	InterPro:IPR011993
InterPro:NECAP_PHear	EnsemblPlantsGene:Os01g0614700	EnsemblPlants:Os01t0614700-01	PFAM:PF07933	InterPro:PH-like_dom_sf	PANTHER:PTHR12847
PANTHER:PTHR12847:SF4	UniProt:Q5ZDX7	SUPFAM:SSF50729	UniParc:UPI00004504D7	RefSeq:XP_015615791.1	SEG:seg

Description

ABC TRANSPORTER I FAMILY MEMBER 13Similar to Adaptin ear-binding coat-associated protein 1. (Os01t0614700-01);Adaptin ear-binding coat-associated protein 1 NECAP-1 family protein. (Os01t0614700-02)

Coordinates

chr1:+:24375877..24379899

Molecular Weight (calculated)

34221.6 Da

IEP (calculated)

4.652

GRAVY (calculated)

-0.698

Length

310 amino acids

Sequence
(BLAST)

001: MSSTGEQSQA KAEAEEAVEL VLFQVAECYV YLIPPRKTAA SYRADEWNVN KWAWEGTLKV VSKGEECIIK LEDKNTGELY ARAFLREDEP HPVEPVIDSS
101: RYFVLRVEEN IDGRQRHAFI GLGFRERPQA YDFQAALHDH MKYLNKKKTA EEMVQHYEKS SSVDYSLKEG ETLVLQLKNK ESGAKIKSAF FEQGLNKLSF
201: NEKANSKEAP VSLKLPPPPP SPVSPTDSGI AASPFKAEFP SQDQPAADTG ADTTPFKAEF PSSHEQPAAD NVASSPPPKA EAAPQEQPTA AEKAPQESVD
301: DDFGDFQAAG

Best Arabidopsis Sequence Match ( AT3G58600.1 )
(BLAST)

001: MDQASSSSTM EEDKKSSTDP VNVDDNEERE AIEIALFQVP ECYVYLIPPR KTAASYRADE WDVNKWAWEG ALKVVSKGEE CIIKLVDKTT GELYAQAFLR
101: EGELHPVEAV IDSSRYFVLR VEEKIDGRVR HAFIGLGFRE RTEAYDFQAA LHDHMKYLNK KKTAEEMEQH YQNTSSVDYS LKEGETIVLQ LKNRSDKDSK
201: SKTVEKSLGN LSLEDKGKSI ETTIPSIILP PPPPGPLSPV TTAQKSPSSL PPSLSLQRSS EQQDLDTKRE EEEEEKKEDL KAKDGGVEDA PDDDFGDFQA
301: AG

Arabidopsis Description

Adaptin ear-binding coat-associated protein 1 NECAP-1 [Source:UniProtKB/TrEMBL;Acc:Q84WV7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.