Factsheet for Os01t0702900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 1
mitochondrion 3
nucleus 1
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus, peroxisome, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G319900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	59.69	17.07
Os06t0558766-00	Rice	cytosol	29.46	16.38
TraesCS2D01G451500.1	Wheat	nucleus	66.67	15.69
Os04t0588350-00	Rice	nucleus, plastid	67.44	15.65
TraesCSU01G155200.1	Wheat	nucleus	65.89	15.62
TraesCS2A01G451700.1	Wheat	nucleus	65.89	15.62
TraesCS2A01G451800.1	Wheat	nucleus	65.89	15.57
TraesCS2A01G342300.1	Wheat	nucleus	62.02	15.21
TraesCS2B01G473300.1	Wheat	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	65.89	15.12
HORVU4Hr1G013750.2	Barley	nucleus	65.12	15.11
TraesCS2D01G320700.1	Wheat	nucleus	62.02	15.04
TraesCS2B01G340000.1	Wheat	nucleus	61.24	15.02
KXG27007	Sorghum	nucleus	63.57	15.02
HORVU2Hr1G079870.2	Barley	nucleus	62.02	14.84
TraesCS2B01G473400.1	Wheat	plastid	41.09	14.52
Zm00001d002505_P001	Maize	nucleus	60.47	14.13
Os02t0227400-01	Rice	extracellular	51.16	10.82
Os07t0688500-00	Rice	cytosol	32.56	8.02
Os03t0313300-01	Rice	mitochondrion	27.13	6.41
Os06t0319600-01	Rice	cytosol	1.55	1.55
HORVU2Hr1G105500.3	Barley	cytosol	3.1	0.72
Os06t0558700-01	Rice	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.1410.10	MapMan:16.2.1.1.1	EntrezGene:4324242	ProteinID:BAF05912.2	ProteinID:BAS73907.1	ProteinID:EEE55261.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004652	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006378
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016779	GO:GO:0031123	GO:GO:0043631	EnsemblPlantsGene:Os01g0702900	EnsemblPlants:Os01t0702900-01	PFAM:PF04928
PANTHER:PTHR10682	PANTHER:PTHR10682:SF26	InterPro:PolA_pol_cen_dom	InterPro:PolyA_polymerase	UniProt:Q0JK16	SUPFAM:SSF81631
TMHMM:TMhelix	UniParc:UPI0001932C39	RefSeq:XP_015635307.1	SEG:seg	:	:

Description

Similar to Sucrose-phosphate synthase (EC 2.4.1.14). (Os01t0702900-01)

Coordinates

chr1:-:29146688..29148255

Molecular Weight (calculated)

13942.1 Da

IEP (calculated)

9.864

GRAVY (calculated)

0.167

Length

129 amino acids

Sequence
(BLAST)

001: MRFRGVQVDL VYAGVCLPWC PTTWSGPQCD RSVLRGLDDL ATARSLNGIR VADEILRLVP ETAVFRTMLR CVKHWAKARG VYSNVAGFLG GIGWAILVAR
101: MCQLYPNTSP ACCSRASSAA LRGGSGPAR

Best Arabidopsis Sequence Match ( AT2G25850.9 )
(BLAST)

001: MVSTQQRTDD DSSQPVKASL KSYGITEPLS IAGPSAADVK RNLELEKFLV DEGLYESKEE TMRREEVVVR IDQIVKHWVK QLTRQRGYTD QMVEDANAVI
101: FTFGSYRLGV HGPMADIDTL CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL VIPQDLDISN SSVLCDVDEQ
201: TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS
301: FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES
401: RFRQLTLKIE RDTNGMLMCH PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD VHVSHVRRRQ LPSFVFPNGY
501: KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKNDDEI MNSRPEKREK RASCSLHTLD AASPDSSGIT TSGTPQIGIV PGPRAECLVT GDLVCNVTSL
601: PNVEVEAEKF ISKITELRKF SQYEHTSGSE QILEVDSRAL VQSYHDLAEP VAKHVRPDLS ALLACEGGQN KEIGHDMGSE SINDTDTQHL PRRLNVNEDV
701: DEVEREAKLG EIAGGVLWNG HCGRNLDHEV SFCCSMTMDT GGGTLIVLGI VIMGCYRVL

Arabidopsis Description

PAPS2PAPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VXR1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.