Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0404900-01 | Rice | nucleus | 55.71 | 10.99 |
| Bra028454.1-P | Field mustard | nucleus | 12.86 | 5.06 |
| CDX67451 | Canola | nucleus | 12.86 | 5.06 |
| CDY11680 | Canola | nucleus | 12.86 | 5.06 |
| Os08t0481400-01 | Rice | nucleus | 15.71 | 4.09 |
| Os09t0470500-01 | Rice | nucleus | 14.29 | 3.61 |
| Os03t0188900-01 | Rice | nucleus | 12.86 | 2.89 |
| Os02t0649300-01 | Rice | nucleus | 10.0 | 2.68 |
| Os04t0541700-02 | Rice | nucleus | 7.14 | 1.81 |
| Os09t0528200-01 | Rice | nucleus | 5.71 | 1.61 |
| Os08t0416000-01 | Rice | nucleus | 7.14 | 1.43 |
| Os02t0729700-01 | Rice | nucleus | 5.71 | 1.17 |
| Os10t0377300-01 | Rice | nucleus | 4.29 | 0.98 |
| Os09t0379600-00 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os03t0170600-01 | EnsemblPlantsGene:Os03g0170600 | ProteinID:BAS82527.1 | SEG:seg | UniParc:UPI000393BDFD | UniProt:A0A0P0VTU2 |
| MapMan:35.1 | : | : | : | : | : |
Description
HOMEOBOX GENE 21Similar to Homeobox-leucine zipper protein HOX21. (Os03t0170600-01)
Coordinates
chr3:-:3784341..3785140
Molecular Weight (calculated)
7167.2 Da
IEP (calculated)
5.848
GRAVY (calculated)
-0.410
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: IARPASGGGV DIDQLLHSSS GGAGGPKMEH HGGGGNVQAA SVDTASFGNL LCGVDEPPPF WPWPDHQHFH
001: MSCNNNGLAF FPENFSLQNH HQEEEDHPQL LQDFHGFLGK RSPMNNVQGF CNLDMNGDEE YSDDGSKMGE KKRRLNMEQL KALEKDFELG NKLESDRKLE
101: LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS
201: QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD QQQYN
101: LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS
201: QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD QQQYN
Arabidopsis Description
ATHB-23Homeobox-leucine zipper protein ATHB-23 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.