Factsheet for Os10t0377300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030532_P002	Maize	nucleus	62.62	62.62
Os03t0188900-01	Rice	nucleus	51.15	50.16
GSMUA_Achr10P...	Banana	nucleus	25.57	41.05
Os09t0470500-01	Rice	nucleus	36.72	40.43
GSMUA_Achr7P12740_001	Banana	nucleus	29.84	39.91
GSMUA_Achr6P10310_001	Banana	nucleus	26.56	39.13
Os08t0481400-01	Rice	nucleus	34.1	38.66
GSMUA_Achr3P06620_001	Banana	nucleus	32.79	36.5
GSMUA_Achr10P...	Banana	nucleus	29.51	36.44
GSMUA_Achr7P11760_001	Banana	nucleus	29.18	35.32
GSMUA_Achr10P...	Banana	nucleus	29.18	33.84
GSMUA_Achr2P14750_001	Banana	extracellular, nucleus	29.84	31.82
GSMUA_Achr9P14960_001	Banana	nucleus	28.2	30.61
Os09t0379600-00	Rice	nucleus	19.67	28.57
Os02t0649300-01	Rice	nucleus	21.64	25.29
Os04t0541700-02	Rice	nucleus	22.62	25.0
Os02t0729700-01	Rice	nucleus	27.54	24.49
Os08t0416000-01	Rice	nucleus	25.25	22.06
Os10t0404900-01	Rice	nucleus	25.25	21.69
Os09t0528200-01	Rice	nucleus	17.05	20.88
Os03t0170600-01	Rice	cytosol, nucleus	0.98	4.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:4348492	ProteinID:AAM08542.1	ProteinID:ABB47385.1	ProteinID:ABB47386.1
EMBL:AK243294	ProteinID:BAF26389.2	ProteinID:BAT10602.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os10g0377300	EnsemblPlants:Os10t0377300-01	PFAM:PF00046	PFAM:PF02183
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF300	UniProt:Q338Z7	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI00005E1DB6	RefSeq:XP_015613231.1	SEG:seg	:	:

Description

HOMEOBOX GENE 8Similar to Homeobox-leucine zipper protein HOX8. (Os10t0377300-01)

Coordinates

chr10:+:12041604..12043091

Molecular Weight (calculated)

32736.4 Da

IEP (calculated)

4.857

GRAVY (calculated)

-0.702

Length

305 amino acids

Sequence
(BLAST)

001: MKRPSCRGSS MAIIHDTSDQ QEDNMRSYMD GGGAAAYEEE EEEVEDDDGG GGGGGGGGGG GLGEKKRRLA AEQVRALERS FEADNKLDPE RKARIARDLR
101: LHPRQVAVWF QNRRARWKTK QIERDFAALR SRHDALRLEC DALRRDKDAL AAEIADLRDR VDGQMSVKLE AVAADEHQPP PPPPPPPLAY NSKVVDGSTD
201: SDSSAVFNEE ASPYSGAAID HHHHQTPASY DTAGFTSFFA PSTTLTSSLS FPSMFHASSH FDGHQELLVG GGGAGAVADA DLGGAGFFAG DEHAGGLSWY
301: GAEGW

Best Arabidopsis Sequence Match ( AT4G40060.1 )
(BLAST)

001: MKRLSSSDSM CGLISTSTDE QSPRGYGSNY QSMLEGYDED ATLIEEYSGN HHHMGLSEKK RRLKVDQVKA LEKNFELENK LEPERKTKLA QELGLQPRQV
101: AVWFQNRRAR WKTKQLEKDY GVLKGQYDSL RHNFDSLRRD NDSLLQEISK IKAKVNGEED NNNNKAITEG VKEEEVHKTD SIPSSPLQFL EHSSGFNYRR
201: SFTDLRDLLP NSTVVEAGSS DSCDSSAVLN DETSSDNGRL TPPVTVTGGS FLQFVKTEQT EDHEDFLSGE EACGFFSDEQ PPSLHWYSAS DHWT

Arabidopsis Description

ATHB-16HB16 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.