Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99231 | Sorghum | nucleus | 73.49 | 75.31 |
| Zm00001d021268_P001 | Maize | nucleus | 68.67 | 71.55 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 68.27 | 68.27 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 67.87 | 67.87 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 67.47 | 67.47 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 67.47 | 67.2 |
| Zm00001d006195_P001 | Maize | nucleus | 65.06 | 66.39 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 39.36 | 44.55 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 46.18 | 39.66 |
| CDX89136 | Canola | nucleus | 34.94 | 37.99 |
| Bra014417.1-P | Field mustard | nucleus | 34.54 | 37.72 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 36.55 | 37.45 |
| CDY71532 | Canola | nucleus | 34.14 | 37.28 |
| VIT_02s0025g02590.t01 | Wine grape | nucleus | 28.11 | 36.46 |
| Solyc01g096320.2.1 | Tomato | nucleus | 34.94 | 36.4 |
| KRH06407 | Soybean | nucleus | 35.74 | 36.33 |
| Solyc08g083130.2.1 | Tomato | extracellular, nucleus | 28.51 | 36.22 |
| KRH47840 | Soybean | nucleus | 34.54 | 36.13 |
| Os04t0541700-02 | Rice | nucleus | 39.76 | 35.87 |
| AT3G61890.1 | Thale cress | nucleus | 33.73 | 35.74 |
| VIT_16s0098g01170.t01 | Wine grape | nucleus | 32.13 | 35.56 |
| PGSC0003DMT400047622 | Potato | nucleus | 30.52 | 35.51 |
| Solyc03g082550.2.1 | Tomato | nucleus | 29.72 | 35.41 |
| CDX76591 | Canola | nucleus | 32.53 | 35.37 |
| PGSC0003DMT400000694 | Potato | nucleus | 35.74 | 35.32 |
| CDX80037 | Canola | nucleus | 35.74 | 35.04 |
| CDY41547 | Canola | nucleus | 35.74 | 35.04 |
| Bra004516.1-P | Field mustard | nucleus | 35.74 | 35.04 |
| CDY27308 | Canola | nucleus | 31.73 | 34.5 |
| Bra007637.1-P | Field mustard | nucleus | 31.73 | 34.35 |
| CDY57869 | Canola | nucleus | 31.73 | 34.35 |
| Bra039265.1-P | Field mustard | nucleus | 31.33 | 34.06 |
| KRH64347 | Soybean | nucleus | 33.33 | 33.88 |
| KRH53589 | Soybean | nucleus | 33.73 | 33.47 |
| AT2G46680.1 | Thale cress | nucleus | 34.54 | 33.33 |
| PGSC0003DMT400013968 | Potato | nucleus | 29.72 | 32.89 |
| Solyc06g053220.2.1 | Tomato | nucleus | 29.72 | 32.89 |
| Os02t0649300-01 | Rice | nucleus | 33.73 | 32.18 |
| Os08t0481400-01 | Rice | nucleus | 27.31 | 25.28 |
| Os09t0470500-01 | Rice | nucleus | 26.1 | 23.47 |
| Os09t0379600-00 | Rice | nucleus | 18.47 | 21.9 |
| Os03t0188900-01 | Rice | nucleus | 23.69 | 18.97 |
| Os02t0729700-01 | Rice | nucleus | 24.1 | 17.49 |
| Os10t0377300-01 | Rice | nucleus | 20.88 | 17.05 |
| Os10t0404900-01 | Rice | nucleus | 23.69 | 16.62 |
| Os08t0416000-01 | Rice | nucleus | 23.29 | 16.62 |
| Os03t0170600-01 | Rice | cytosol, nucleus | 1.61 | 5.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:4347647 | EMBL:AK059755 | EMBL:AK103160 | ProteinID:BAD46372.1 |
| ProteinID:BAF25650.1 | ProteinID:BAT09072.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:Leu_zip_homeo | EnsemblPlantsGene:Os09g0528200 | EnsemblPlants:Os09t0528200-01 | PFAM:PF00046 | PFAM:PF02183 |
| PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF122 | UniProt:Q651Z5 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000043A55C | RefSeq:XP_015612316.1 | SEG:seg | : |
Description
HOMEOBOX GENE 6Similar to Homeobox-leucine zipper protein HOX6. (Os09t0528200-01);Similar to Homeobox-leucine zipper protein HOX6. (Os09t0528200-02)
Coordinates
chr9:+:20671994..20673267
Molecular Weight (calculated)
27301.7 Da
IEP (calculated)
5.690
GRAVY (calculated)
-0.816
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGEEDSEWM MMDVGGKGGK GGGGGGAADR KKRFSEEQIK SLESMFATQT KLEPRQKLQL ARELGLQPRQ VAIWFQNKRA RWKSKQLERE YSALRDDYDA
101: LLCSYESLKK EKLALIKQLE KLAEMLQEPR GKYGDNAGDD ARSGGVAGMK KEEFVGAGGA ATLYSSAEGG GTTTTTTAKL MPHFGSDDVD AGLFLRPSSQ
201: HHPPPPHAGA GFTSSEPAAD HQSFNFHSSW PSSTEQTCSS TPWWEFESE
101: LLCSYESLKK EKLALIKQLE KLAEMLQEPR GKYGDNAGDD ARSGGVAGMK KEEFVGAGGA ATLYSSAEGG GTTTTTTAKL MPHFGSDDVD AGLFLRPSSQ
201: HHPPPPHAGA GFTSSEPAAD HQSFNFHSSW PSSTEQTCSS TPWWEFESE
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.