Factsheet for Os02t0729700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30829	Sorghum	nucleus	78.43	78.89
Zm00001d017920_P001	Maize	nucleus	75.22	78.18
Zm00001d051749_P001	Maize	nucleus	74.93	75.81
TraesCS6B01G321100.1	Wheat	nucleus	74.93	74.93
TraesCS6A01G290800.1	Wheat	nucleus	73.76	74.41
TraesCS6D01G272000.1	Wheat	nucleus	74.34	68.18
HORVU6Hr1G072810.7	Barley	nucleus	69.1	68.1
GSMUA_Achr8P25940_001	Banana	nucleus	48.98	58.54
GSMUA_Achr9P18360_001	Banana	nucleus	46.06	55.83
VIT_14s0066g01440.t01	Wine grape	nucleus	40.82	51.28
Solyc02g086930.2.1	Tomato	nucleus	41.98	50.53
PGSC0003DMT400001322	Potato	nucleus	41.69	50.18
AT3G01470.1	Thale cress	nucleus	38.19	48.16
Bra039116.1-P	Field mustard	nucleus	36.15	47.69
CDY37519	Canola	nucleus	36.15	47.69
Os08t0416000-01	Rice	nucleus	48.4	47.56
CDY49056	Canola	nucleus	35.86	46.77
KRH20316	Soybean	nucleus	38.78	46.67
KRG93337	Soybean	nucleus	35.86	46.07
CDY28673	Canola	nucleus	36.15	45.59
Bra040519.1-P	Field mustard	nucleus	35.86	44.89
Os09t0379600-00	Rice	nucleus	23.32	38.1
Os08t0481400-01	Rice	nucleus	26.82	34.2
Os09t0470500-01	Rice	nucleus	27.11	33.57
Os03t0188900-01	Rice	nucleus	27.7	30.55
Os02t0649300-01	Rice	nucleus	21.57	28.35
Os10t0377300-01	Rice	nucleus	24.49	27.54
Os04t0541700-02	Rice	nucleus	19.83	24.64
Os10t0404900-01	Rice	nucleus	25.07	24.23
Os09t0528200-01	Rice	nucleus	17.49	24.1
Os03t0170600-01	Rice	cytosol, nucleus	1.17	5.71

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:4330610	EMBL:AK119592	EMBL:AY554029	EMBL:AY559045
ProteinID:BAD15915.1	ProteinID:BAD16354.1	ProteinID:BAF09922.1	ProteinID:BAS80732.1	ncoils:Coil	ProteinID:EAZ24491.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os02g0729700
EnsemblPlants:Os02t0729700-01	PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF136	UniProt:Q6YWR4	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0000358BEC
RefSeq:XP_015626253.1	SEG:seg	:	:	:	:

Description

HOMEOBOX GENE 16Similar to HAHB-7 (Fragment). (Os02t0729700-01);Similar to HAHB-7 (Fragment). (Os02t0729700-02)

Coordinates

chr2:+:30381303..30383336

Molecular Weight (calculated)

37616.3 Da

IEP (calculated)

4.443

GRAVY (calculated)

-0.695

Length

343 amino acids

Sequence
(BLAST)

001: MESGRLIFST AGSGAGQMLF LDCGAGGGGV GGGAMFHRGA RPVLGMEEGG RGVKRPFFTT PDELLEEEYY DEQLPEKKRR LTPEQVHLLE RSFEEENKLE
101: PERKTELARK LGLQPRQVAV WFQNRRARWK TKQLERDFDR LKASFDALRA DHDALLQDNH RLHSQVMSLT EKLQEKETTT EGSAGAAVDV PGLPAAADVK
201: VAVPDAEEPA LEEAAAAFEE QQEQQVKAED RLSTGSGGSA VVDTDAQLVV GCGRQHLAAV DSSVESYFPG GDEYHDCVMG PMDHAAGGIQ SEEDDGAGSD
301: EGCSYYADDA GVLFADHGHH HHHQHADDDE EDGQQISCWW MWN

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.