Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G387300.1 | Wheat | nucleus | 67.39 | 76.54 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 71.74 | 76.15 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 69.2 | 72.08 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 68.48 | 71.05 |
| EES11198 | Sorghum | nucleus | 67.75 | 69.26 |
| Zm00001d002799_P001 | Maize | nucleus | 65.22 | 68.97 |
| Zm00001d025964_P001 | Maize | nucleus | 62.68 | 64.55 |
| Os02t0649300-01 | Rice | nucleus | 50.36 | 53.26 |
| Os09t0528200-01 | Rice | nucleus | 35.87 | 39.76 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 28.62 | 35.91 |
| VIT_16s0098g01170.t01 | Wine grape | nucleus | 28.62 | 35.11 |
| Solyc03g082550.2.1 | Tomato | nucleus | 26.45 | 34.93 |
| PGSC0003DMT400047622 | Potato | nucleus | 26.81 | 34.58 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 30.43 | 34.57 |
| CDY71532 | Canola | nucleus | 28.26 | 34.21 |
| Solyc08g083130.2.1 | Tomato | extracellular, nucleus | 24.28 | 34.18 |
| VIT_02s0025g02590.t01 | Wine grape | nucleus | 23.55 | 33.85 |
| CDX89136 | Canola | nucleus | 27.9 | 33.62 |
| Bra014417.1-P | Field mustard | nucleus | 27.54 | 33.33 |
| CDY41547 | Canola | nucleus | 30.43 | 33.07 |
| CDY27308 | Canola | nucleus | 27.17 | 32.75 |
| CDX76591 | Canola | nucleus | 27.17 | 32.75 |
| AT2G46680.1 | Thale cress | nucleus | 30.43 | 32.56 |
| Solyc01g096320.2.1 | Tomato | nucleus | 27.9 | 32.22 |
| AT3G61890.1 | Thale cress | nucleus | 27.17 | 31.91 |
| Bra004516.1-P | Field mustard | nucleus | 29.35 | 31.89 |
| CDX80037 | Canola | nucleus | 29.35 | 31.89 |
| Bra039265.1-P | Field mustard | nucleus | 26.45 | 31.88 |
| KRH47840 | Soybean | nucleus | 27.17 | 31.51 |
| Bra007637.1-P | Field mustard | nucleus | 26.09 | 31.3 |
| CDY57869 | Canola | nucleus | 26.09 | 31.3 |
| KRH06407 | Soybean | nucleus | 27.17 | 30.61 |
| PGSC0003DMT400000694 | Potato | nucleus | 27.9 | 30.56 |
| KRH64347 | Soybean | nucleus | 26.81 | 30.2 |
| Solyc06g053220.2.1 | Tomato | nucleus | 24.28 | 29.78 |
| KRH53589 | Soybean | nucleus | 26.81 | 29.48 |
| PGSC0003DMT400013968 | Potato | nucleus | 23.55 | 28.89 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 29.35 | 27.93 |
| Os08t0481400-01 | Rice | nucleus | 27.17 | 27.88 |
| Os09t0470500-01 | Rice | nucleus | 26.45 | 26.35 |
| Os09t0379600-00 | Rice | nucleus | 17.39 | 22.86 |
| Os10t0377300-01 | Rice | nucleus | 25.0 | 22.62 |
| Os03t0188900-01 | Rice | nucleus | 22.83 | 20.26 |
| Os02t0729700-01 | Rice | nucleus | 24.64 | 19.83 |
| Os10t0404900-01 | Rice | nucleus | 23.91 | 18.59 |
| Os08t0416000-01 | Rice | nucleus | 22.83 | 18.05 |
| Os03t0170600-01 | Rice | cytosol, nucleus | 1.81 | 7.14 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:4336542 | EMBL:AP014960 | EMBL:AY224440 | EMBL:AY554030 |
| ProteinID:BAF15360.2 | ProteinID:CAD41267.1 | EMBL:CM000141 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | EnsemblPlantsGene:Os04g0541700 | EnsemblPlants:Os04t0541700-02 | PFAM:PF00046 |
| PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF234 |
| UniProt:Q7XUJ5 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0001722D0F | RefSeq:XP_015634133.1 | SEG:seg |
Description
HOMEOBOX GENE 22Similar to Homeobox-leucine zipper protein HOX22. (Os04t0541700-01);Homeodomain-leucine zipper (HD-Zip) protein, Transcription factor, ABA-mediated drought and salt tolerance (Os04t0541700-02)
Coordinates
chr4:+:27124166..27125512
Molecular Weight (calculated)
30654.8 Da
IEP (calculated)
5.007
GRAVY (calculated)
-0.714
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGRTQLASW ARIAMDRGDH HHLQQQHQFL MPPPAPVVPP QLCMPAMMAD EQYMDLGGGG AAAAPGRGGA GERKRRFTEE QIRSLESMFH AHHAKLEPRE
101: KAELARELGL QPRQVAIWFQ NKRARWRSKQ LEHDYAALRS KYDALHSRVE SLKQEKLALT VQLHELRERL REREERSGNG GAATTAASSS SCNGSGSEEV
201: DDDDDKRNAA AGCLDLEPPE SCVLGGATCA TPADVSVESD QCDDQLDYDE GLFPESFCAT PELWEPWPLV EWNAVA
101: KAELARELGL QPRQVAIWFQ NKRARWRSKQ LEHDYAALRS KYDALHSRVE SLKQEKLALT VQLHELRERL REREERSGNG GAATTAASSS SCNGSGSEEV
201: DDDDDKRNAA AGCLDLEPPE SCVLGGATCA TPADVSVESD QCDDQLDYDE GLFPESFCAT PELWEPWPLV EWNAVA
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.