Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11198 | Sorghum | nucleus | 86.21 | 83.33 |
| Zm00001d025964_P001 | Maize | nucleus | 78.16 | 76.12 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 66.67 | 71.6 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 68.2 | 68.46 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 69.73 | 68.42 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 67.05 | 66.04 |
| Os04t0541700-02 | Rice | nucleus | 68.97 | 65.22 |
| Zm00001d017422_P001 | Maize | nucleus | 49.04 | 54.47 |
| Zm00001d006195_P001 | Maize | nucleus | 35.63 | 38.11 |
| Zm00001d021268_P001 | Maize | nucleus | 34.87 | 38.08 |
| Solyc03g082550.2.1 | Tomato | nucleus | 29.5 | 36.84 |
| PGSC0003DMT400047622 | Potato | nucleus | 28.74 | 35.05 |
| VIT_16s0098g01170.t01 | Wine grape | nucleus | 29.12 | 33.78 |
| CDY71532 | Canola | nucleus | 29.12 | 33.33 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 27.97 | 33.18 |
| CDX89136 | Canola | nucleus | 28.74 | 32.75 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 30.27 | 32.51 |
| Bra014417.1-P | Field mustard | nucleus | 28.35 | 32.46 |
| Solyc08g083130.2.1 | Tomato | extracellular, nucleus | 24.14 | 32.14 |
| VIT_02s0025g02590.t01 | Wine grape | nucleus | 23.37 | 31.77 |
| CDX76591 | Canola | nucleus | 27.2 | 31.0 |
| AT3G61890.1 | Thale cress | nucleus | 27.59 | 30.64 |
| CDY27308 | Canola | nucleus | 26.82 | 30.57 |
| CDY41547 | Canola | nucleus | 29.5 | 30.32 |
| Solyc06g053220.2.1 | Tomato | nucleus | 26.05 | 30.22 |
| PGSC0003DMT400013968 | Potato | nucleus | 25.67 | 29.78 |
| Bra039265.1-P | Field mustard | nucleus | 26.05 | 29.69 |
| CDY57869 | Canola | nucleus | 26.05 | 29.57 |
| Bra007637.1-P | Field mustard | nucleus | 26.05 | 29.57 |
| AT2G46680.1 | Thale cress | nucleus | 29.12 | 29.46 |
| CDX80037 | Canola | nucleus | 28.35 | 29.13 |
| Bra004516.1-P | Field mustard | nucleus | 28.35 | 29.13 |
| Solyc01g096320.2.1 | Tomato | nucleus | 26.44 | 28.87 |
| KRH47840 | Soybean | nucleus | 26.05 | 28.57 |
| KRH06407 | Soybean | nucleus | 26.82 | 28.57 |
| KRH64347 | Soybean | nucleus | 26.05 | 27.76 |
| PGSC0003DMT400000694 | Potato | nucleus | 26.44 | 27.38 |
| KRH53589 | Soybean | nucleus | 26.05 | 27.09 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 29.89 | 26.9 |
| Zm00001d020804_P001 | Maize | nucleus | 26.05 | 26.05 |
| Zm00001d005951_P001 | Maize | nucleus | 26.44 | 22.62 |
| Zm00001d005692_P001 | Maize | nucleus | 24.14 | 22.26 |
| Zm00001d032316_P001 | Maize | nucleus | 22.99 | 22.22 |
| Zm00001d050310_P001 | Maize | nucleus | 22.99 | 22.06 |
| Zm00001d051749_P001 | Maize | nucleus | 28.35 | 21.83 |
| Zm00001d017920_P001 | Maize | nucleus | 27.59 | 21.82 |
| Zm00001d030532_P002 | Maize | nucleus | 23.37 | 20.0 |
| Zm00001d027991_P001 | Maize | nucleus | 24.52 | 19.63 |
| Zm00001d014201_P001 | Maize | nucleus | 23.75 | 17.82 |
| Zm00001d027852_P001 | Maize | nucleus | 23.37 | 17.73 |
| Zm00001d048312_P001 | Maize | nucleus | 23.37 | 17.73 |
| Zm00001d033005_P001 | Maize | nucleus | 22.99 | 16.53 |
| Zm00001d048227_P001 | Maize | extracellular, nucleus, plastid | 20.69 | 14.59 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103646132 | MapMan:15.5.3.1 | UniProt:A0A060CYX6 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | EMBL:KJ728250 | InterPro:Leu_zip_homeo | ProteinID:ONM15386.1 | PFAM:PF00046 |
| PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF234 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002217010 | EnsemblPlantsGene:Zm00001d002799 | EnsemblPlants:Zm00001d002799_P001 | EnsemblPlants:Zm00001d002799_T001 |
| SEG:seg | : | : | : | : | : |
Description
Homeobox-transcription factor 66Homeobox-leucine zipper protein ATHB-12
Coordinates
chr2:-:22972434..22973879
Molecular Weight (calculated)
29386.3 Da
IEP (calculated)
4.759
GRAVY (calculated)
-0.715
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRPDHQQQQ FFMPTTVQVP QPQQQQQQLC VPMLDEPPSS FLAGRGGGGA SGRGERKRRF TEEQIRSLES MFHAHHAKLE PREKAELARE LGLQPRQVAI
101: WFQNKRARWR SKQLEHDYAL LRAKFDDLHA HVESLKQDKL ALTTQLSELS ERLRERDDRA AAAGGGGRET MASSSSCIGG GGEEEAEDDK RNVLLFGCVD
201: MEPPAESCVL VGSTCAALAD VSVESECDDQ HLHYDDEFPE SYCAMPELWE PWPLVEWNAV A
101: WFQNKRARWR SKQLEHDYAL LRAKFDDLHA HVESLKQDKL ALTTQLSELS ERLRERDDRA AAAGGGGRET MASSSSCIGG GGEEEAEDDK RNVLLFGCVD
201: MEPPAESCVL VGSTCAALAD VSVESECDDQ HLHYDDEFPE SYCAMPELWE PWPLVEWNAV A
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Arabidopsis Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.