Factsheet for Zm00001d005692_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98832	Sorghum	nucleus	80.57	71.92
TraesCS5D01G205000.1	Wheat	nucleus	56.89	53.85
TraesCS5B01G197700.1	Wheat	nucleus	56.54	53.51
TraesCS5A01G199300.1	Wheat	nucleus	56.18	53.0
Os09t0379600-00	Rice	nucleus	38.16	51.43
HORVU5Hr1G059410.2	Barley	nucleus	52.3	45.12
Zm00001d050310_P001	Maize	nucleus	38.16	39.71
Zm00001d032316_P001	Maize	nucleus	36.75	38.52
GSMUA_Achr8P25940_001	Banana	nucleus	33.92	33.45
GSMUA_Achr9P18360_001	Banana	nucleus	33.22	33.22
Zm00001d017920_P001	Maize	nucleus	37.81	32.42
AT3G01470.1	Thale cress	nucleus	30.39	31.62
Zm00001d051749_P001	Maize	nucleus	36.75	30.68
CDY28673	Canola	nucleus	29.33	30.51
Bra039116.1-P	Field mustard	nucleus	27.92	30.38
CDY37519	Canola	nucleus	27.92	30.38
Bra040519.1-P	Field mustard	nucleus	29.33	30.29
Zm00001d020804_P001	Maize	nucleus	27.92	30.27
CDY49056	Canola	nucleus	27.56	29.66
VIT_14s0066g01440.t01	Wine grape	nucleus	28.27	29.3
KRG93337	Soybean	nucleus	26.5	28.09
Zm00001d017422_P001	Maize	nucleus	23.32	28.09
Solyc02g086930.2.1	Tomato	nucleus	27.56	27.37
KRH20316	Soybean	nucleus	27.56	27.37
PGSC0003DMT400001322	Potato	nucleus	27.21	27.02
Zm00001d005951_P001	Maize	nucleus	27.21	25.25
Zm00001d002799_P001	Maize	nucleus	22.26	24.14
Zm00001d025964_P001	Maize	nucleus	22.61	23.88
Zm00001d021268_P001	Maize	nucleus	19.43	23.01
Zm00001d030532_P002	Maize	nucleus	24.73	22.95
Zm00001d027852_P001	Maize	nucleus	27.21	22.38
Zm00001d048312_P001	Maize	nucleus	26.5	21.8
Zm00001d027991_P001	Maize	nucleus	24.73	21.47
Zm00001d006195_P001	Maize	nucleus	18.02	20.9
Zm00001d014201_P001	Maize	nucleus	25.44	20.69
Zm00001d033005_P001	Maize	nucleus	25.44	19.83
Zm00001d048227_P001	Maize	extracellular, nucleus, plastid	20.85	15.95

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100384387	MapMan:15.5.3.1	EMBL:BT070003	UniProt:C0PNY4	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	EMBL:KJ727577	InterPro:Leu_zip_homeo	ProteinID:ONM21674.1
PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF215	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000195D167	EnsemblPlantsGene:Zm00001d005692	EnsemblPlants:Zm00001d005692_P001
EnsemblPlants:Zm00001d005692_T001	SEG:seg	:	:	:	:

Description

Homeobox-transcription factor 34Homeobox-leucine zipper protein HAT5

Coordinates

chr2:-:183562202..183564363

Molecular Weight (calculated)

31226.4 Da

IEP (calculated)

5.123

GRAVY (calculated)

-0.644

Length

283 amino acids

Sequence
(BLAST)

001: MDPASSLISS SAVPFPAAGD GGGQRQVFLF GGGFVGGAPP LVGGAADGRR KRPFQLTAHD ELQLQLQLQL DDELCGLDYE LHGPQQERTT KRRLTAEQVR
101: ELELSFEEEK RKLEPKRKLE PERKSELARR LGIAPRQVAV WFQNRRARWR SKQLEQDFDR LRAAHDDLIA GRDALLADND RLRSQVITLT EKLQTKESAA
201: AAAEPGEQTV AAQATAYAVL EGDKLCSGSA AAPAAAGTND SPESYFAGAR SPPSSPEDDD RAFFFPPDAL LNNWAWVWND RQY

Best Arabidopsis Sequence Match ( AT1G27045.1 )
(BLAST)

001: MENSDTDSEV FFWFQNQNQN HSHKFPSSCF PPSSHSAFYG SSSMINTETA TMDEEDVCES YMMREITKKR KLTPIQLRLL EESFEEEKRL EPDRKLWLAE
101: KLGLQPSQVA VWFQNRRARY KTKQLEHDCD SLKASYAKLK TDWDILFVQN QTLKSKVDLL KEKLKMQENL ETQSIERKRL GEEGSSVKSD NTQYSEEEGL
201: ENQYSFPELA VLGFYYDPTL TASNLRL

Arabidopsis Description

Homeobox-leucine zipper protein family [Source:TAIR;Acc:AT1G27045]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.