Factsheet for Zm00001d030532_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0377300-01	Rice	nucleus	62.62	62.62
Zm00001d027991_P001	Maize	nucleus	49.18	46.01
Zm00001d020804_P001	Maize	nucleus	36.39	42.53
GSMUA_Achr6P10310_001	Banana	nucleus	28.2	41.55
GSMUA_Achr7P12740_001	Banana	nucleus	30.82	41.23
GSMUA_Achr10P...	Banana	nucleus	25.25	40.53
Zm00001d005951_P001	Maize	nucleus	38.03	38.03
GSMUA_Achr10P...	Banana	nucleus	30.49	37.65
Zm00001d048227_P001	Maize	extracellular, nucleus, plastid	45.25	37.3
GSMUA_Achr7P11760_001	Banana	nucleus	30.49	36.9
GSMUA_Achr3P06620_001	Banana	nucleus	33.11	36.86
GSMUA_Achr10P...	Banana	nucleus	30.16	34.98
GSMUA_Achr2P14750_001	Banana	extracellular, nucleus	31.48	33.57
GSMUA_Achr9P14960_001	Banana	nucleus	29.18	31.67
Zm00001d017422_P001	Maize	nucleus	20.98	27.23
Zm00001d050310_P001	Maize	nucleus	23.93	26.84
Zm00001d032316_P001	Maize	nucleus	23.61	26.67
Zm00001d017920_P001	Maize	nucleus	26.89	24.85
Zm00001d051749_P001	Maize	nucleus	27.54	24.78
Zm00001d005692_P001	Maize	nucleus	22.95	24.73
Zm00001d021268_P001	Maize	nucleus	19.34	24.69
Zm00001d025964_P001	Maize	nucleus	20.66	23.51
Zm00001d002799_P001	Maize	nucleus	20.0	23.37
Zm00001d006195_P001	Maize	nucleus	18.03	22.54
Zm00001d014201_P001	Maize	nucleus	25.25	22.13
Zm00001d048312_P001	Maize	nucleus	24.92	22.09
Zm00001d027852_P001	Maize	nucleus	24.59	21.8
Zm00001d033005_P001	Maize	nucleus	25.25	21.21

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100273913	MapMan:15.5.3.1	UniProt:A0A1D6KCV0	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	ProteinID:ONM01070.1	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF300	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0008452B18
EnsemblPlantsGene:Zm00001d030532	EnsemblPlants:Zm00001d030532_P002	EnsemblPlants:Zm00001d030532_T002	SEG:seg	:	:

Description

Homeobox-transcription factor 127Homeobox-leucine zipper protein ATHB-6

Coordinates

chr1:+:142193026..142194949

Molecular Weight (calculated)

33340.2 Da

IEP (calculated)

4.567

GRAVY (calculated)

-0.619

Length

305 amino acids

Sequence
(BLAST)

001: MKRPTSRGSS MVSGQATTDL QASFISPLLA LAEDSCRSME PHGVDGDATA AAERDDVDAG AYDEEVDEEE ELAGSRGGLG EKKRRLAADQ VRALERSFEV
101: DNKLDPERKA RIARDLSLHP RQVAVWFQNR RARWKTKQIE RDFAALRVRH DALRVECDAL RRDKDALAAE IKELRGMVEK QMEVKLESAA EELLPVATRS
201: AAAAAVYNKD GSTDSDSSAV FNEEASPYPY SGAALDHQQQ QETSHPLGFT GFTSFLTSSF PSVYHGDSHL DQEADGFFSA AAAGDGFFAE EQSAGIGSWY
301: GGEGW

Best Arabidopsis Sequence Match ( AT4G40060.1 )
(BLAST)

001: MKRLSSSDSM CGLISTSTDE QSPRGYGSNY QSMLEGYDED ATLIEEYSGN HHHMGLSEKK RRLKVDQVKA LEKNFELENK LEPERKTKLA QELGLQPRQV
101: AVWFQNRRAR WKTKQLEKDY GVLKGQYDSL RHNFDSLRRD NDSLLQEISK IKAKVNGEED NNNNKAITEG VKEEEVHKTD SIPSSPLQFL EHSSGFNYRR
201: SFTDLRDLLP NSTVVEAGSS DSCDSSAVLN DETSSDNGRL TPPVTVTGGS FLQFVKTEQT EDHEDFLSGE EACGFFSDEQ PPSLHWYSAS DHWT

Arabidopsis Description

ATHB-16HB16 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.