Factsheet for GSMUA_Achr2P14750_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P11760_001	Banana	nucleus	64.69	73.41
GSMUA_Achr10P...	Banana	nucleus	40.91	61.58
GSMUA_Achr6P10310_001	Banana	nucleus	44.41	61.35
GSMUA_Achr7P12740_001	Banana	nucleus	42.66	53.51
OQU81036	Sorghum	nucleus	32.52	50.54
Zm00001d020804_P001	Maize	nucleus	42.66	46.74
GSMUA_Achr10P...	Banana	nucleus	39.51	45.75
HORVU5Hr1G070260.1	Barley	nucleus	42.66	45.69
Os09t0470500-01	Rice	nucleus	44.06	45.49
GSMUA_Achr3P06620_001	Banana	nucleus	43.36	45.26
EER96901	Sorghum	nucleus	43.01	45.05
TraesCS5B01G246700.1	Wheat	nucleus	42.31	44.98
TraesCS5D01G256200.1	Wheat	nucleus	42.31	44.81
TraesCS5A01G249000.1	Wheat	nucleus	42.31	44.81
GSMUA_Achr10P...	Banana	nucleus	40.21	43.73
Os08t0481400-01	Rice	nucleus	40.56	43.12
Zm00001d005951_P001	Maize	nucleus	43.36	40.66
GSMUA_Achr9P14960_001	Banana	nucleus	38.11	38.79
TraesCS4A01G405800.1	Wheat	nucleus	34.62	34.74
Os03t0188900-01	Rice	nucleus	35.31	32.48
EER92730	Sorghum	nucleus	36.36	32.1
Zm00001d027991_P001	Maize	nucleus	36.36	31.9
TraesCS4D01G303500.1	Wheat	nucleus	34.97	31.65
TraesCS4B01G305300.1	Wheat	nucleus	34.97	31.65
Zm00001d030532_P002	Maize	nucleus	33.57	31.48
Os10t0377300-01	Rice	nucleus	31.82	29.84
GSMUA_Achr6P36450_001	Banana	nucleus	24.13	29.74
GSMUA_Achr5P05300_001	Banana	nucleus	21.33	29.61
GSMUA_Achr1P21620_001	Banana	nucleus	27.97	28.47
GSMUA_Achr7P20950_001	Banana	nucleus	23.43	28.39
GSMUA_Achr2P07420_001	Banana	nucleus	28.32	27.74
GSMUA_Achr9P14570_001	Banana	nucleus	25.17	27.38
GSMUA_Achr7P11600_001	Banana	nucleus	26.22	27.17
GSMUA_Achr7P09730_001	Banana	nucleus	28.32	27.0
GSMUA_Achr8P25940_001	Banana	nucleus	26.92	26.83
GSMUA_Achr1P16280_001	Banana	nucleus	20.63	26.82
GSMUA_Achr1P12270_001	Banana	nucleus	27.27	26.62
GSMUA_Achr4P00550_001	Banana	nucleus	25.87	26.43
GSMUA_Achr3P06190_001	Banana	nucleus	25.87	26.15
GSMUA_Achr9P18360_001	Banana	nucleus	25.52	25.8
GSMUA_Achr3P21430_001	Banana	nucleus	23.78	25.56
GSMUA_Achr10P...	Banana	nucleus	25.52	25.52
GSMUA_Achr6P10660_001	Banana	nucleus	25.17	25.44
HORVU4Hr1G078410.5	Barley	nucleus, plastid	29.02	25.23
GSMUA_Achr10P...	Banana	nucleus	28.32	23.41
Zm00001d048227_P001	Maize	extracellular, nucleus, plastid	29.72	22.97
GSMUA_Achr1P18670_001	Banana	nucleus	21.68	21.38

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr2G14750_001	EnsemblPlants:GSMUA_Achr2P14750_001	EnsemblPlants:GSMUA_Achr2T14750_001	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	UniProt:M0S816	PFAM:PF00046
PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF300
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000296A836	SEG:seg	:	:

Description

Putative Homeobox-leucine zipper protein ATHB-16 [Source:GMGC_GENE;Acc:GSMUA_Achr2G14750_001]

Coordinates

chr2:+:16382065..16383270

Molecular Weight (calculated)

32311.9 Da

IEP (calculated)

4.345

GRAVY (calculated)

-0.505

Length

286 amino acids

Sequence
(BLAST)

001: MVYKENLALS PSPYQVTLSL SLSLSLVDYL VFSLLLQSDL FYLFSVEEKG KYEAVLDGTE ELDGCEEEEP CGTGLSGLGE KKRRLSVEQV KALEKNFEVE
101: NKLDPERKLR LAQDLGLQPR QVAVWFQNRR ARWKTKQLER DYGALKARHD ALKLDCDALS RDNEALLAEI AELKAKLADS GMDAMESETK AVEEERPPLI
201: HKDGASDSDS SVVFNDETSP HAGTVLHQHF LMGFRSQCPF LPFEDKAQAE KGYLDEELLA GEELCSSLFS EQQAPNFSWY CSDEWD

Best Arabidopsis Sequence Match ( AT4G40060.1 )
(BLAST)

001: MKRLSSSDSM CGLISTSTDE QSPRGYGSNY QSMLEGYDED ATLIEEYSGN HHHMGLSEKK RRLKVDQVKA LEKNFELENK LEPERKTKLA QELGLQPRQV
101: AVWFQNRRAR WKTKQLEKDY GVLKGQYDSL RHNFDSLRRD NDSLLQEISK IKAKVNGEED NNNNKAITEG VKEEEVHKTD SIPSSPLQFL EHSSGFNYRR
201: SFTDLRDLLP NSTVVEAGSS DSCDSSAVLN DETSSDNGRL TPPVTVTGGS FLQFVKTEQT EDHEDFLSGE EACGFFSDEQ PPSLHWYSAS DHWT

Arabidopsis Description

ATHB-16HB16 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.