Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P20950_001 | Banana | nucleus | 58.57 | 69.49 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 57.14 | 68.97 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 61.07 | 60.0 |
| KRH74821 | Soybean | nucleus | 59.64 | 57.39 |
| KRH69308 | Soybean | nucleus | 60.36 | 57.29 |
| KRG99129 | Soybean | nucleus | 56.43 | 56.63 |
| KRH45876 | Soybean | nucleus | 55.71 | 55.71 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 54.29 | 54.09 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 54.64 | 54.06 |
| GSMUA_Achr10P... | Banana | nucleus | 54.64 | 53.5 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 55.71 | 53.24 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 53.57 | 53.0 |
| PGSC0003DMT400002259 | Potato | nucleus | 43.93 | 52.34 |
| CDY44091 | Canola | nucleus | 49.64 | 52.26 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 53.93 | 51.71 |
| Bra007881.1-P | Field mustard | nucleus | 52.5 | 51.58 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 48.93 | 51.5 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 50.71 | 51.45 |
| PGSC0003DMT400065805 | Potato | nucleus | 56.07 | 51.31 |
| Solyc05g007180.2.1 | Tomato | nucleus | 55.71 | 51.15 |
| CDY38759 | Canola | nucleus | 51.79 | 51.06 |
| AT1G69780.1 | Thale cress | nucleus | 53.21 | 50.68 |
| Solyc01g010600.2.1 | Tomato | nucleus | 43.93 | 50.62 |
| Bra016266.1-P | Field mustard | nucleus | 51.43 | 50.0 |
| KRG99070 | Soybean | nucleus | 30.71 | 50.0 |
| CDY11659 | Canola | nucleus | 51.43 | 50.0 |
| CDY23547 | Canola | nucleus | 48.93 | 48.93 |
| CDY70870 | Canola | nucleus | 52.5 | 48.84 |
| Bra003980.1-P | Field mustard | nucleus | 43.21 | 48.02 |
| CDY48391 | Canola | nucleus | 43.21 | 48.02 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 50.71 | 42.9 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 50.71 | 41.89 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 50.36 | 41.72 |
| Zm00001d027852_P001 | Maize | nucleus | 50.71 | 41.28 |
| EER92780 | Sorghum | nucleus | 51.43 | 40.56 |
| Zm00001d048312_P001 | Maize | nucleus | 48.93 | 39.83 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 50.71 | 36.04 |
| Os10t0404900-01 | Rice | nucleus | 45.0 | 35.49 |
| GSMUA_Achr10P... | Banana | nucleus | 23.93 | 35.26 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 31.79 | 34.77 |
| Zm00001d014201_P001 | Maize | nucleus | 42.5 | 34.2 |
| EER94272 | Sorghum | nucleus | 43.21 | 33.43 |
| GSMUA_Achr7P12740_001 | Banana | nucleus | 26.79 | 32.89 |
| Zm00001d033005_P001 | Maize | nucleus | 41.79 | 32.23 |
| GSMUA_Achr5P05300_001 | Banana | nucleus | 23.57 | 32.04 |
| GSMUA_Achr6P10310_001 | Banana | nucleus | 23.57 | 31.88 |
| GSMUA_Achr10P... | Banana | nucleus | 26.07 | 29.55 |
| GSMUA_Achr10P... | Banana | nucleus | 27.14 | 28.9 |
| GSMUA_Achr7P11760_001 | Banana | nucleus | 25.36 | 28.17 |
| GSMUA_Achr9P14570_001 | Banana | nucleus | 26.43 | 28.14 |
| GSMUA_Achr7P09730_001 | Banana | nucleus | 30.0 | 28.0 |
| GSMUA_Achr3P06620_001 | Banana | nucleus | 27.14 | 27.74 |
| GSMUA_Achr3P06190_001 | Banana | nucleus | 27.14 | 26.86 |
| GSMUA_Achr2P14750_001 | Banana | extracellular, nucleus | 26.43 | 25.87 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 26.07 | 25.44 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 25.0 | 24.73 |
| GSMUA_Achr9P14960_001 | Banana | nucleus | 23.93 | 23.84 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 18.21 | 23.18 |
| GSMUA_Achr10P... | Banana | nucleus | 26.79 | 21.68 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 19.64 | 18.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr4G00550_001 | EnsemblPlants:GSMUA_Achr4P00550_001 | EnsemblPlants:GSMUA_Achr4T00550_001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0SJX2 | PFAM:PF00046 |
| PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000294E833 | SEG:seg | : | : |
Description
Putative Homeobox-leucine zipper protein ATHB-13 [Source:GMGC_GENE;Acc:GSMUA_Achr4G00550_001]
Coordinates
chr4:+:420909..422178
Molecular Weight (calculated)
31696.3 Da
IEP (calculated)
5.140
GRAVY (calculated)
-0.759
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MTCNGMPPLF PANLLLQIPH DETSPPGFGG ERPYLASYPQ DLTLGLLSND CVGAASVETL LGKRSVSFSR MEACEELNIE EDLSDDGSQP AGEKKKRLNL
101: EQVRVLEKNF EIGNKLEPGR KMELARALGL QPRQVAIWFQ NRRARWKTKQ LEKDYDVLKR QLEAMKTENE ALQAQNKKLL SEVLALKGKE TSEPINLNKE
201: TEGSCSFRSD NSSDINLDLS TSDPHKSRVF FPSYRPPPAK TETPKEEHSS IQEESFCTMF CSTDDQSAFW AWSEQHNFHQ
101: EQVRVLEKNF EIGNKLEPGR KMELARALGL QPRQVAIWFQ NRRARWKTKQ LEKDYDVLKR QLEAMKTENE ALQAQNKKLL SEVLALKGKE TSEPINLNKE
201: TEGSCSFRSD NSSDINLDLS TSDPHKSRVF FPSYRPPPAK TETPKEEHSS IQEESFCTMF CSTDDQSAFW AWSEQHNFHQ
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.