Factsheet for GSMUA_Achr7P09730_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	67.0	58.09
GSMUA_Achr5P05300_001	Banana	nucleus	25.67	37.38
GSMUA_Achr9P14570_001	Banana	nucleus	31.67	36.12
GSMUA_Achr7P12740_001	Banana	nucleus	27.33	35.96
GSMUA_Achr10P...	Banana	nucleus	22.0	34.74
VIT_17s0000g05630.t01	Wine grape	nucleus	36.67	34.7
Solyc03g113270.2.1	Tomato	nucleus, plastid	36.67	34.06
PGSC0003DMT400065207	Potato	nucleus	36.67	33.64
GSMUA_Achr6P10310_001	Banana	nucleus	23.0	33.33
GSMUA_Achr10P...	Banana	nucleus	26.33	31.98
KRH54501	Soybean	nucleus, plastid	34.67	31.9
GSMUA_Achr6P36450_001	Banana	nucleus	24.67	31.9
GSMUA_Achr3P06190_001	Banana	nucleus	30.0	31.8
GSMUA_Achr9P18360_001	Banana	nucleus	29.67	31.45
KRH03417	Soybean	nucleus, plastid	34.33	31.31
GSMUA_Achr3P21430_001	Banana	nucleus	27.67	31.2
KRH56963	Soybean	nucleus, plastid	34.33	31.12
GSMUA_Achr8P25940_001	Banana	nucleus	29.33	30.66
GSMUA_Achr7P20950_001	Banana	nucleus	24.0	30.51
GSMUA_Achr10P...	Banana	nucleus	26.67	30.42
GSMUA_Achr1P12270_001	Banana	nucleus	29.67	30.38
GSMUA_Achr3P06620_001	Banana	nucleus	27.67	30.29
GSMUA_Achr7P11760_001	Banana	nucleus	25.33	30.16
GSMUA_Achr4P00550_001	Banana	nucleus	28.0	30.0
GSMUA_Achr1P21620_001	Banana	nucleus	27.67	29.54
GSMUA_Achr10P...	Banana	nucleus	28.0	29.37
GSMUA_Achr2P07420_001	Banana	nucleus	28.33	29.11
KRH63409	Soybean	nucleus, plastid	25.33	28.57
GSMUA_Achr2P14750_001	Banana	extracellular, nucleus	27.0	28.32
GSMUA_Achr7P11600_001	Banana	nucleus	26.0	28.26
GSMUA_Achr6P10660_001	Banana	nucleus	26.33	27.92
GSMUA_Achr1P16280_001	Banana	nucleus	19.0	25.91
GSMUA_Achr9P14960_001	Banana	nucleus	24.0	25.62
GSMUA_Achr1P18670_001	Banana	nucleus	19.67	20.34

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G09730_001	EnsemblPlants:GSMUA_Achr7P09730_001	EnsemblPlants:GSMUA_Achr7T09730_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	UniProt:M0TG61	PFAM:PF00046	PFAM:PF02183
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF306	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI0002968B4B	SEG:seg	:	:	:	:

Description

Putative Homeobox-leucine zipper protein HAT5 [Source:GMGC_GENE;Acc:GSMUA_Achr7G09730_001]

Coordinates

chr7:+:7920627..7922862

Molecular Weight (calculated)

34439.8 Da

IEP (calculated)

6.190

GRAVY (calculated)

-0.782

Length

300 amino acids

Sequence
(BLAST)

001: MAGRWRDGSS STAVLLQREA TYKEYAGQLL APGTPTGGSL GSWCLATLKD GYGSSPDRPL FRPIELEEID DDESDELLHQ PEKKRRLTAE QVQFLEKSFE
101: FENKLEPERK LRIAKFLGLK PRQIAIWFQN RRARWKTKQL EKDYEALKSS YHNLKMDHGR LLKEKEELEI EVLSLKNKLL MKEKGCMEPF ELNRYPNKLR
201: NSNSNLDTGM KKVHGQTMPC KQEDINSANS TMLDSESAHC IDEGSYSMLM ELTSPSNPFV HVRSDQSQIG EVKACSFSSL QDNSCGSEFH VTEQDLWLWP

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.