CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 6
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03417	Soybean	nucleus, plastid	90.33	90.88
KRH63409	Soybean	nucleus, plastid	55.59	69.17
KRH54501	Soybean	nucleus, plastid	67.67	68.71
VIT_17s0000g05630.t01	Wine grape	nucleus	63.44	66.25
PGSC0003DMT400065207	Potato	nucleus	46.53	47.09
Solyc03g113270.2.1	Tomato	nucleus, plastid	45.32	46.44
KRH74760	Soybean	nucleus	48.34	46.38
KRH69374	Soybean	nucleus	47.13	45.22
KRH45836	Soybean	nucleus	43.2	44.69
KRG99178	Soybean	nucleus	41.69	42.59
KRG93337	Soybean	nucleus	33.84	41.95
KRH20316	Soybean	nucleus	35.65	41.4
GSMUA_Achr7P09730_001	Banana	nucleus	31.12	34.33
KRH43132	Soybean	nucleus	30.82	32.69
KRH01157	Soybean	nucleus	25.98	32.09
KRH45876	Soybean	nucleus	26.89	31.79
KRH74821	Soybean	nucleus	27.79	31.62
KRH59287	Soybean	nucleus	29.31	31.6
KRG99129	Soybean	nucleus	26.59	31.54
KRH40114	Soybean	nucleus	25.68	31.48
KRH69308	Soybean	nucleus	27.79	31.19
KRG97544	Soybean	nucleus	30.21	31.06
KRH20007	Soybean	nucleus	20.54	30.77
KRG93515	Soybean	nucleus	26.89	30.48
KRG96107	Soybean	nucleus	19.64	30.37
KRH18490	Soybean	nucleus	26.59	30.24
KRH31331	Soybean	nucleus	28.4	29.94
KRH32628	Soybean	nucleus	20.24	29.78
GSMUA_Achr10P...	Banana	nucleus	31.12	29.77
KRH47840	Soybean	nucleus	19.94	27.73
KRH67812	Soybean	nucleus	19.34	27.47
KRH55168	Soybean	nucleus	16.31	27.0
KRH06407	Soybean	nucleus	19.64	26.53
KRH26193	Soybean	nucleus	15.41	26.42
KRH53589	Soybean	nucleus	19.94	26.29
KRH64347	Soybean	nucleus	19.03	25.71
KRG99070	Soybean	nucleus	12.99	25.0

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100799054	MapMan:15.5.3.1	EMBL:ACUP02002803	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G030000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	UniProt:I1JZS9	InterPro:IPR001356	EnsemblPlants:KRH56963	ProteinID:KRH56963
ProteinID:KRH56963.1	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF306	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002339B2F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2581123..2583418

Molecular Weight (calculated)

37415.1 Da

IEP (calculated)

4.504

GRAVY (calculated)

-0.845

Length

331 amino acids

Sequence
(BLAST)

001: MAGSGSAFSN ITSFLRTQQP SSQPLDSSLF LSAPSSAPFL GSRSMMSFEG EGGKGCNGSF FRAFDMDDNG DECMDEYFHQ PEKKRRLSAS QVQFLEKSFE
101: EENKLEPERK TKLAKDLGLQ PRQVAIWFQN RRARWKNKQL EKDYETLHAS FESLKSNYDC LLKEKDKLKA EVASLTEKVL ARGKQEGHMK QAESESEETK
201: GLLHLQEQEP PQRLLLQSVS EGEGSKVSSV VGGCKQEDIS SARSDILDSD SPHYTDGVHS ALLEHGDSSY VFEPDQSDMS QDEEDNLSKS LYPSYLFPKL
301: EEDVDYSDPP ESSCNFGFPE EDHVLWTWAY Y

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.