Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69374 | Soybean | nucleus | 93.33 | 93.33 |
| KRH45836 | Soybean | nucleus | 57.97 | 62.5 |
| KRG99178 | Soybean | nucleus | 56.23 | 59.88 |
| VIT_01s0026g01550.t01 | Wine grape | nucleus | 55.65 | 59.81 |
| Solyc05g006980.2.1 | Tomato | nucleus | 44.64 | 53.47 |
| PGSC0003DMT400045471 | Potato | nucleus | 45.51 | 52.16 |
| PGSC0003DMT400007376 | Potato | nucleus | 44.35 | 51.69 |
| Solyc04g005800.2.1 | Tomato | nucleus | 44.35 | 51.52 |
| KRH54501 | Soybean | nucleus, plastid | 46.96 | 49.69 |
| KRH56963 | Soybean | nucleus, plastid | 46.38 | 48.34 |
| KRH63409 | Soybean | nucleus, plastid | 37.1 | 48.12 |
| KRH03417 | Soybean | nucleus, plastid | 45.8 | 48.02 |
| KRH20316 | Soybean | nucleus | 30.43 | 36.84 |
| KRG93337 | Soybean | nucleus | 28.41 | 36.7 |
| KRH74821 | Soybean | nucleus | 28.12 | 33.33 |
| KRG99129 | Soybean | nucleus | 26.67 | 32.97 |
| KRH69308 | Soybean | nucleus | 28.12 | 32.88 |
| KRH45876 | Soybean | nucleus | 26.67 | 32.86 |
| KRH01157 | Soybean | nucleus | 24.35 | 31.34 |
| KRH59287 | Soybean | nucleus | 27.54 | 30.94 |
| KRG96107 | Soybean | nucleus | 19.13 | 30.84 |
| KRH43132 | Soybean | nucleus | 27.83 | 30.77 |
| KRH20007 | Soybean | nucleus | 19.71 | 30.77 |
| KRG97544 | Soybean | nucleus | 28.7 | 30.75 |
| KRH40114 | Soybean | nucleus | 24.06 | 30.74 |
| KRH18490 | Soybean | nucleus | 25.51 | 30.24 |
| KRH55168 | Soybean | nucleus | 17.39 | 30.0 |
| KRH31331 | Soybean | nucleus | 27.25 | 29.94 |
| KRG93515 | Soybean | nucleus | 25.22 | 29.79 |
| KRH67812 | Soybean | nucleus | 20.0 | 29.61 |
| KRH26193 | Soybean | nucleus | 16.52 | 29.53 |
| KRH47840 | Soybean | nucleus | 20.29 | 29.41 |
| KRH32628 | Soybean | nucleus | 19.13 | 29.33 |
| KRG99070 | Soybean | nucleus | 14.2 | 28.49 |
| KRH06407 | Soybean | nucleus | 20.0 | 28.16 |
| KRH64347 | Soybean | nucleus | 18.84 | 26.53 |
| KRH53589 | Soybean | nucleus | 18.84 | 25.9 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EMBL:ACUP02000067 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G041700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | UniProt:I1J5K2 | InterPro:IPR001356 | EnsemblPlants:KRH74760 | ProteinID:KRH74760 | ProteinID:KRH74760.1 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF495 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000233771B | : |
Description
hypothetical protein
Coordinates
chr1:-:4530106..4532731
Molecular Weight (calculated)
39175.9 Da
IEP (calculated)
4.356
GRAVY (calculated)
-0.878
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGKLYAGS NMSLLLQNER LPCSSEVLES LWAHTSNPAS FQGSKSVVDF ENVNGSRVTD RPFFQALEKE ENCDEDYEGC FHQPGKKRRL TSEQVQFLER
101: NFEVENKLEP ERKVQLAKEL GLQPRQVAIW FQNRRARFKT KQLEKDYGVL KASYDRLKGD YESLVQENDK LKAEVNSLES KLILRDKEKE ENSDDKSSPD
201: DAVNSSPHNN KEPIMDLLIS KNATTSENGT EVSTLPLPIM VTCKQEDANS AKSDVLDSDS PHCTDYGNHP SSFVEPADSS HAFEPEDHSE DFSQDEEDNL
301: SENFLTLPSS CCLPKVEEPC YDDPPENSCN FGFHVEDQTF CFWPY
101: NFEVENKLEP ERKVQLAKEL GLQPRQVAIW FQNRRARFKT KQLEKDYGVL KASYDRLKGD YESLVQENDK LKAEVNSLES KLILRDKEKE ENSDDKSSPD
201: DAVNSSPHNN KEPIMDLLIS KNATTSENGT EVSTLPLPIM VTCKQEDANS AKSDVLDSDS PHCTDYGNHP SSFVEPADSS HAFEPEDHSE DFSQDEEDNL
301: SENFLTLPSS CCLPKVEEPC YDDPPENSCN FGFHVEDQTF CFWPY
001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
Arabidopsis Description
HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.