CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 6
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56963	Soybean	nucleus, plastid	90.88	90.33
KRH63409	Soybean	nucleus, plastid	54.1	66.92
KRH54501	Soybean	nucleus, plastid	66.26	66.87
VIT_17s0000g05630.t01	Wine grape	nucleus	62.61	64.98
PGSC0003DMT400065207	Potato	nucleus	45.9	46.18
KRH74760	Soybean	nucleus	48.02	45.8
Solyc03g113270.2.1	Tomato	nucleus, plastid	44.68	45.51
KRH69374	Soybean	nucleus	46.81	44.64
KRH45836	Soybean	nucleus	42.25	43.44
KRG99178	Soybean	nucleus	41.03	41.67
KRG93337	Soybean	nucleus	33.74	41.57
KRH20316	Soybean	nucleus	35.56	41.05
GSMUA_Achr7P09730_001	Banana	nucleus	31.31	34.33
KRH45876	Soybean	nucleus	26.75	31.43
KRH43132	Soybean	nucleus	29.79	31.41
KRH74821	Soybean	nucleus	27.66	31.27
KRG99129	Soybean	nucleus	26.44	31.18
KRH01157	Soybean	nucleus	25.23	30.97
KRH69308	Soybean	nucleus	27.66	30.85
KRH40114	Soybean	nucleus	25.23	30.74
KRH59287	Soybean	nucleus	28.57	30.62
KRG97544	Soybean	nucleus	29.48	30.12
KRG96107	Soybean	nucleus	19.45	29.91
KRG93515	Soybean	nucleus	26.44	29.79
KRH18490	Soybean	nucleus	26.14	29.55
GSMUA_Achr10P...	Banana	nucleus	31.0	29.48
KRH20007	Soybean	nucleus	19.76	29.41
KRH31331	Soybean	nucleus	27.66	28.98
KRH32628	Soybean	nucleus	19.45	28.44
KRH55168	Soybean	nucleus	16.72	27.5
KRH67812	Soybean	nucleus	19.45	27.47
KRH26193	Soybean	nucleus	15.81	26.94
KRH47840	Soybean	nucleus	19.45	26.89
KRH53589	Soybean	nucleus	20.36	26.69
KRH06407	Soybean	nucleus	19.45	26.12
KRH64347	Soybean	nucleus	19.15	25.71
KRG99070	Soybean	nucleus	12.77	24.42

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100804450	MapMan:15.5.3.1	EMBL:ACUP02010348	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G096700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	UniProt:I1MTP8	InterPro:IPR001356	EnsemblPlants:KRH03417	ProteinID:KRH03417
ProteinID:KRH03417.1	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF306	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0001B3716E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:7613823..7616193

Molecular Weight (calculated)

37383.0 Da

IEP (calculated)

4.554

GRAVY (calculated)

-0.872

Length

329 amino acids

Sequence
(BLAST)

001: MAASGSSFSN ITSFLRNQQP SSQPLDSSLF LSAPSIFVSG SRSMVSFEAE GGKGCNGSFF RAFDMDDNGD ECMDEYFHKP EKKRRLSMNQ VQFLEKSFEE
101: ENKLEPERKT KLAKDLGLRP RQVAIWFQNR RARWKTKTLE KDYEALHASF ENLKSNYDSL LKEKDNLKAE VASLNEKVLA RGKQEGHMKQ QAESEEETKR
201: LLHLQEQEPP QRLLLESVSE GEGSKVSSVV GGCKQEDISS ARSDILDSDS PHYTDGVNSA LLEHGDSSYV FEHDQSDMSQ DEEDNLSKSL YPSYLFPKLE
301: EDVDYSDPPE SSCNFGFSEE DHALWTWAY

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.