Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH69308 | Soybean | nucleus | 97.94 | 96.61 |
KRG99129 | Soybean | nucleus | 85.22 | 88.89 |
KRH45876 | Soybean | nucleus | 84.54 | 87.86 |
VIT_01s0026g01950.t01 | Wine grape | nucleus | 83.16 | 84.91 |
KRG99070 | Soybean | nucleus | 47.08 | 79.65 |
PGSC0003DMT400065805 | Potato | nucleus | 75.6 | 71.9 |
Solyc05g007180.2.1 | Tomato | nucleus | 74.91 | 71.48 |
VIT_14s0108g00390.t01 | Wine grape | nucleus | 64.95 | 66.78 |
PGSC0003DMT400002259 | Potato | nucleus | 52.58 | 65.11 |
AT1G69780.1 | Thale cress | nucleus | 65.29 | 64.63 |
CDY44091 | Canola | nucleus | 58.42 | 63.91 |
Bra007881.1-P | Field mustard | nucleus | 62.54 | 63.86 |
Solyc01g010600.2.1 | Tomato | nucleus | 53.26 | 63.79 |
Bra016266.1-P | Field mustard | nucleus | 62.89 | 63.54 |
CDY38759 | Canola | nucleus | 61.86 | 63.38 |
CDY11659 | Canola | nucleus | 62.54 | 63.19 |
CDY70870 | Canola | nucleus | 62.89 | 60.8 |
CDY23547 | Canola | nucleus | 58.42 | 60.71 |
GSMUA_Achr6P36450_001 | Banana | nucleus | 48.11 | 60.34 |
GSMUA_Achr4P00550_001 | Banana | nucleus | 57.39 | 59.64 |
GSMUA_Achr1P21620_001 | Banana | nucleus | 57.04 | 59.07 |
GSMUA_Achr7P20950_001 | Banana | nucleus | 47.77 | 58.9 |
GSMUA_Achr1P12270_001 | Banana | nucleus | 59.11 | 58.7 |
GSMUA_Achr7P11600_001 | Banana | nucleus | 55.33 | 58.33 |
Bra003980.1-P | Field mustard | nucleus | 50.17 | 57.94 |
CDY48391 | Canola | nucleus | 50.17 | 57.94 |
GSMUA_Achr2P07420_001 | Banana | nucleus | 58.08 | 57.88 |
KRH40114 | Soybean | nucleus | 53.26 | 57.41 |
GSMUA_Achr3P21430_001 | Banana | nucleus | 52.23 | 57.14 |
GSMUA_Achr10P... | Banana | nucleus | 55.33 | 56.29 |
KRH01157 | Soybean | nucleus | 51.55 | 55.97 |
GSMUA_Achr6P10660_001 | Banana | nucleus | 54.3 | 55.83 |
KRH18490 | Soybean | nucleus | 55.67 | 55.67 |
KRG93515 | Soybean | nucleus | 54.98 | 54.79 |
TraesCS4B01G287600.1 | Wheat | nucleus | 57.73 | 50.76 |
Zm00001d027852_P001 | Maize | nucleus | 58.76 | 49.71 |
TraesCS4D01G286400.2 | Wheat | nucleus | 57.73 | 49.56 |
TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 56.7 | 48.82 |
EER92780 | Sorghum | nucleus | 59.45 | 48.73 |
Zm00001d048312_P001 | Maize | nucleus | 55.33 | 46.8 |
HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 58.08 | 42.89 |
Os10t0404900-01 | Rice | nucleus | 48.45 | 39.72 |
Zm00001d014201_P001 | Maize | nucleus | 46.05 | 38.51 |
HORVU4Hr1G075170.1 | Barley | nucleus | 33.33 | 37.89 |
EER94272 | Sorghum | nucleus | 47.08 | 37.85 |
Zm00001d033005_P001 | Maize | nucleus | 43.64 | 34.99 |
KRG96107 | Soybean | nucleus | 24.05 | 32.71 |
KRH67812 | Soybean | nucleus | 24.05 | 30.04 |
KRG93337 | Soybean | nucleus | 27.15 | 29.59 |
KRH20316 | Soybean | nucleus | 28.87 | 29.47 |
KRH20007 | Soybean | nucleus | 22.34 | 29.41 |
KRH59287 | Soybean | nucleus | 30.93 | 29.32 |
KRH31331 | Soybean | nucleus | 31.27 | 28.98 |
KRH43132 | Soybean | nucleus | 30.93 | 28.85 |
KRH69374 | Soybean | nucleus | 34.02 | 28.7 |
KRG97544 | Soybean | nucleus | 31.62 | 28.57 |
KRH54501 | Soybean | nucleus, plastid | 31.96 | 28.53 |
KRH32628 | Soybean | nucleus | 21.99 | 28.44 |
KRH45836 | Soybean | nucleus | 31.27 | 28.44 |
KRH74760 | Soybean | nucleus | 33.33 | 28.12 |
KRH56963 | Soybean | nucleus, plastid | 31.62 | 27.79 |
KRH03417 | Soybean | nucleus, plastid | 31.27 | 27.66 |
KRG99178 | Soybean | nucleus | 29.9 | 26.85 |
KRH55168 | Soybean | nucleus | 18.21 | 26.5 |
KRH26193 | Soybean | nucleus | 17.53 | 26.42 |
KRH47840 | Soybean | nucleus | 21.31 | 26.05 |
KRH64347 | Soybean | nucleus | 21.65 | 25.71 |
KRH53589 | Soybean | nucleus | 21.31 | 24.7 |
KRH06407 | Soybean | nucleus | 20.62 | 24.49 |
KRH63409 | Soybean | nucleus, plastid | 21.65 | 23.68 |
Protein Annotations
Gene3D:1.10.10.60 | EntrezGene:100814080 | MapMan:15.5.3.1 | UniProt:A0A0R0LDX5 | EMBL:ACUP02000074 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_01G044600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif |
InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlants:KRH74821 | ProteinID:KRH74821 |
ProteinID:KRH74821.1 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0003DED812 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:4922421..4924649
Molecular Weight (calculated)
33217.9 Da
IEP (calculated)
6.586
GRAVY (calculated)
-0.910
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MWHKTCNEMA FFPANFMLQT PHHDDHHHQP PPSLTSILPT CAPQEYHGGV TFLGKRSMSF SSGIEHGEEV NAEEDLSDDG SQAGEKKRRL NMEQVKTLEK
101: SFELGNKLEP ERKMQLARAL GLQPRQIAIW FQNRRARWKT KQLEKDYDVL KRQYEAVKSD NDALQAQNQK LQAEILALKS REPTESINLN KETEGSCSNR
201: SENSSDIKLD ISRTPAIDSP HSTHQQSRPL FPPSSARPAG VAQLFQTSSR PDLPSCQKID QMVKEESLSN MFCGMDDQSG FWPWLEQQHF N
101: SFELGNKLEP ERKMQLARAL GLQPRQIAIW FQNRRARWKT KQLEKDYDVL KRQYEAVKSD NDALQAQNQK LQAEILALKS REPTESINLN KETEGSCSNR
201: SENSSDIKLD ISRTPAIDSP HSTHQQSRPL FPPSSARPAG VAQLFQTSSR PDLPSCQKID QMVKEESLSN MFCGMDDQSG FWPWLEQQHF N
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.