Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P10660_001 | Banana | nucleus | 78.32 | 79.15 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 68.88 | 70.11 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 69.58 | 68.15 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 69.23 | 67.58 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 64.34 | 66.67 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 59.79 | 60.0 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 53.5 | 57.52 |
| KRH45876 | Soybean | nucleus | 55.94 | 57.14 |
| KRG99129 | Soybean | nucleus | 55.59 | 56.99 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 46.15 | 55.93 |
| KRH74821 | Soybean | nucleus | 56.29 | 55.33 |
| CDY44091 | Canola | nucleus | 51.4 | 55.26 |
| KRH69308 | Soybean | nucleus | 56.99 | 55.25 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 54.2 | 54.77 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 53.5 | 54.64 |
| PGSC0003DMT400002259 | Potato | nucleus | 44.41 | 54.04 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 43.01 | 53.02 |
| KRG99070 | Soybean | nucleus | 31.47 | 52.33 |
| PGSC0003DMT400065805 | Potato | nucleus | 55.94 | 52.29 |
| Solyc01g010600.2.1 | Tomato | nucleus | 44.41 | 52.26 |
| Solyc05g007180.2.1 | Tomato | nucleus | 55.59 | 52.13 |
| Bra007881.1-P | Field mustard | nucleus | 51.75 | 51.93 |
| CDY38759 | Canola | nucleus | 51.4 | 51.76 |
| Bra016266.1-P | Field mustard | nucleus | 51.4 | 51.04 |
| Bra003980.1-P | Field mustard | nucleus | 44.76 | 50.79 |
| CDY48391 | Canola | nucleus | 44.76 | 50.79 |
| CDY11659 | Canola | nucleus | 51.05 | 50.69 |
| AT1G69780.1 | Thale cress | nucleus | 52.1 | 50.68 |
| CDY70870 | Canola | nucleus | 52.45 | 49.83 |
| Zm00001d027852_P001 | Maize | nucleus | 59.44 | 49.42 |
| CDY23547 | Canola | nucleus | 47.55 | 48.57 |
| Zm00001d048312_P001 | Maize | nucleus | 58.39 | 48.55 |
| EER92780 | Sorghum | nucleus | 60.14 | 48.45 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 55.94 | 48.34 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 55.94 | 47.2 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 55.24 | 46.75 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 55.94 | 40.61 |
| Os10t0404900-01 | Rice | nucleus | 50.35 | 40.56 |
| Zm00001d014201_P001 | Maize | nucleus | 48.25 | 39.66 |
| EER94272 | Sorghum | nucleus | 50.0 | 39.5 |
| Zm00001d033005_P001 | Maize | nucleus | 48.95 | 38.57 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 32.17 | 35.94 |
| GSMUA_Achr5P05300_001 | Banana | nucleus | 25.17 | 34.95 |
| GSMUA_Achr10P... | Banana | nucleus | 22.73 | 34.21 |
| GSMUA_Achr6P10310_001 | Banana | nucleus | 22.73 | 31.4 |
| GSMUA_Achr7P12740_001 | Banana | nucleus | 24.48 | 30.7 |
| GSMUA_Achr9P14570_001 | Banana | nucleus | 27.27 | 29.66 |
| GSMUA_Achr3P06620_001 | Banana | nucleus | 27.62 | 28.83 |
| GSMUA_Achr10P... | Banana | nucleus | 25.87 | 28.14 |
| GSMUA_Achr7P09730_001 | Banana | nucleus | 29.37 | 28.0 |
| GSMUA_Achr7P11760_001 | Banana | nucleus | 24.48 | 27.78 |
| GSMUA_Achr10P... | Banana | nucleus | 23.78 | 27.53 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 26.57 | 26.48 |
| GSMUA_Achr3P06190_001 | Banana | nucleus | 25.87 | 26.15 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 25.87 | 26.15 |
| GSMUA_Achr2P14750_001 | Banana | extracellular, nucleus | 25.52 | 25.52 |
| GSMUA_Achr9P14960_001 | Banana | nucleus | 23.08 | 23.49 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 17.13 | 22.27 |
| GSMUA_Achr10P... | Banana | nucleus | 26.57 | 21.97 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 18.53 | 18.28 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr10G18860_001 | EnsemblPlants:GSMUA_Achr10P18860_001 | EnsemblPlants:GSMUA_Achr10T18860_001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0RJG1 | PFAM:PF00046 |
| PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002951074 | SEG:seg | : | : |
Description
Homeobox-leucine zipper protein HOX21 [Source:GMGC_GENE;Acc:GSMUA_Achr10G18860_001]
Coordinates
chr10:+:25421398..25423223
Molecular Weight (calculated)
32419.1 Da
IEP (calculated)
6.111
GRAVY (calculated)
-0.732
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MACNGMASSS SFPSNFMFHT ETPYEEGNQL TAPLGSLLHT GPQDLRGGVA PVMGKRSISF PGIESCEEMN ADDDLSDDGW QAGEKKKRLN IEQVRTLERN
101: FELGNKLEPE RKMQLARALG LRPRQVAIWF QNRRARWKTK QLEKDYDVLK RQFEAIKTEN EALQSQNKKL RAEILAFRGT ETSDMINLNK ETEGSCSNRS
201: ENSSEINIDI SRTSVIESSL PPHQILPYFP SIRPADINQL LHNSCKPEFQ CAKVENEAPE VSFSNLLGSM GDQSALWSWP DHHHFH
101: FELGNKLEPE RKMQLARALG LRPRQVAIWF QNRRARWKTK QLEKDYDVLK RQFEAIKTEN EALQSQNKKL RAEILAFRGT ETSDMINLNK ETEGSCSNRS
201: ENSSEINIDI SRTSVIESSL PPHQILPYFP SIRPADINQL LHNSCKPEFQ CAKVENEAPE VSFSNLLGSM GDQSALWSWP DHHHFH
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.