Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99129 | Soybean | nucleus | 97.14 | 97.49 |
| KRG99070 | Soybean | nucleus | 55.0 | 89.53 |
| KRH74821 | Soybean | nucleus | 87.86 | 84.54 |
| KRH69308 | Soybean | nucleus | 87.5 | 83.05 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 81.79 | 80.35 |
| Solyc05g007180.2.1 | Tomato | nucleus | 76.79 | 70.49 |
| PGSC0003DMT400065805 | Potato | nucleus | 76.43 | 69.93 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 66.07 | 65.37 |
| PGSC0003DMT400002259 | Potato | nucleus | 53.93 | 64.26 |
| AT1G69780.1 | Thale cress | nucleus | 66.07 | 62.93 |
| CDY44091 | Canola | nucleus | 59.29 | 62.41 |
| Bra007881.1-P | Field mustard | nucleus | 63.21 | 62.11 |
| CDY38759 | Canola | nucleus | 62.14 | 61.27 |
| CDY11659 | Canola | nucleus | 62.5 | 60.76 |
| Bra016266.1-P | Field mustard | nucleus | 62.5 | 60.76 |
| Solyc01g010600.2.1 | Tomato | nucleus | 52.5 | 60.49 |
| CDY70870 | Canola | nucleus | 63.57 | 59.14 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 48.93 | 59.05 |
| CDY23547 | Canola | nucleus | 58.93 | 58.93 |
| KRH40114 | Soybean | nucleus | 55.71 | 57.78 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 56.79 | 57.61 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 59.64 | 57.0 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 47.86 | 56.78 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 56.79 | 56.58 |
| Bra003980.1-P | Field mustard | nucleus | 50.71 | 56.35 |
| CDY48391 | Canola | nucleus | 50.71 | 56.35 |
| GSMUA_Achr10P... | Banana | nucleus | 57.14 | 55.94 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 55.71 | 55.71 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 52.86 | 55.64 |
| KRH01157 | Soybean | nucleus | 52.5 | 54.85 |
| KRG93515 | Soybean | nucleus | 57.14 | 54.79 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 57.14 | 54.79 |
| KRH18490 | Soybean | nucleus | 56.79 | 54.64 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 53.57 | 53.0 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 57.14 | 48.34 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 57.14 | 47.2 |
| Zm00001d027852_P001 | Maize | nucleus | 57.14 | 46.51 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 56.07 | 46.45 |
| EER92780 | Sorghum | nucleus | 58.21 | 45.92 |
| Zm00001d048312_P001 | Maize | nucleus | 55.0 | 44.77 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 56.79 | 40.36 |
| Os10t0404900-01 | Rice | nucleus | 48.21 | 38.03 |
| Zm00001d014201_P001 | Maize | nucleus | 46.07 | 37.07 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 33.57 | 36.72 |
| EER94272 | Sorghum | nucleus | 47.14 | 36.46 |
| KRG96107 | Soybean | nucleus | 25.36 | 33.18 |
| Zm00001d033005_P001 | Maize | nucleus | 42.86 | 33.06 |
| KRH67812 | Soybean | nucleus | 25.0 | 30.04 |
| KRH31331 | Soybean | nucleus | 33.21 | 29.62 |
| KRH20007 | Soybean | nucleus | 23.21 | 29.41 |
| KRH59287 | Soybean | nucleus | 32.14 | 29.32 |
| KRH43132 | Soybean | nucleus | 32.5 | 29.17 |
| KRG97544 | Soybean | nucleus | 32.86 | 28.57 |
| KRG93337 | Soybean | nucleus | 27.14 | 28.46 |
| KRH20316 | Soybean | nucleus | 28.93 | 28.42 |
| KRH32628 | Soybean | nucleus | 22.5 | 28.0 |
| KRH54501 | Soybean | nucleus, plastid | 32.5 | 27.91 |
| KRH45836 | Soybean | nucleus | 31.07 | 27.19 |
| KRH69374 | Soybean | nucleus | 33.21 | 26.96 |
| KRH56963 | Soybean | nucleus, plastid | 31.79 | 26.89 |
| KRH03417 | Soybean | nucleus, plastid | 31.43 | 26.75 |
| KRH74760 | Soybean | nucleus | 32.86 | 26.67 |
| KRH64347 | Soybean | nucleus | 22.86 | 26.12 |
| KRH47840 | Soybean | nucleus | 22.14 | 26.05 |
| KRH55168 | Soybean | nucleus | 18.57 | 26.0 |
| KRG99178 | Soybean | nucleus | 30.0 | 25.93 |
| KRH53589 | Soybean | nucleus | 22.5 | 25.1 |
| KRH26193 | Soybean | nucleus | 17.14 | 24.87 |
| KRH06407 | Soybean | nucleus | 21.43 | 24.49 |
| KRH63409 | Soybean | nucleus, plastid | 21.79 | 22.93 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EMBL:ACUP02005292 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G298400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | UniProt:I1KXR8 | InterPro:IPR001356 | EnsemblPlants:KRH45876 | ProteinID:KRH45876 | ProteinID:KRH45876.1 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0001B3729E | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:41571099..41573570
Molecular Weight (calculated)
31884.3 Da
IEP (calculated)
5.746
GRAVY (calculated)
-0.894
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFFPANFML QTPHQDDHQP PPSLNSIITS CAPQEYHGGG ASFLGKRSMS FSGIELGEEA NAEEDSDDGS QAGEKKRRLN MEQVKTLEKS FELGNKLEPE
101: RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDLLK RQYEAIKADN DALQFQNQKL QTEILALKSR EPTESINLNK ETEGSSSNRS ENSSEIKLDI
201: SRTPAIDSPL STQQNNNNRT LFPSSARPTG VAQLFQTTPR PEIQCQKIDH MVKEESLSNM FCAIDDQSGL WPWLEQQHFN
101: RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDLLK RQYEAIKADN DALQFQNQKL QTEILALKSR EPTESINLNK ETEGSSSNRS ENSSEIKLDI
201: SRTPAIDSPL STQQNNNNRT LFPSSARPTG VAQLFQTTPR PEIQCQKIDH MVKEESLSNM FCAIDDQSGL WPWLEQQHFN
001: MSCNNNGLAF FPENFSLQNH HQEEEDHPQL LQDFHGFLGK RSPMNNVQGF CNLDMNGDEE YSDDGSKMGE KKRRLNMEQL KALEKDFELG NKLESDRKLE
101: LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS
201: QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD QQQYN
101: LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS
201: QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD QQQYN
Arabidopsis Description
ATHB-23Homeobox-leucine zipper protein ATHB-23 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.