Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31331 | Soybean | nucleus | 88.51 | 90.76 |
| KRH43132 | Soybean | nucleus | 68.01 | 70.19 |
| KRH59287 | Soybean | nucleus | 66.46 | 69.71 |
| CDY48942 | Canola | nucleus | 30.12 | 59.88 |
| VIT_07s0191g00180.t01 | Wine grape | nucleus | 61.49 | 59.1 |
| AT2G22430.1 | Thale cress | nucleus | 51.24 | 53.05 |
| Solyc05g051460.2.1 | Tomato | nucleus | 51.55 | 53.04 |
| PGSC0003DMT400043251 | Potato | nucleus | 53.42 | 52.92 |
| Bra030238.1-P | Field mustard | nucleus | 48.45 | 52.53 |
| CDY25597 | Canola | nucleus | 48.76 | 52.51 |
| CDX89467 | Canola | nucleus | 48.45 | 52.0 |
| CDY25596 | Canola | nucleus | 42.86 | 51.88 |
| Bra038523.1-P | Field mustard | nucleus | 50.0 | 51.77 |
| CDY13761 | Canola | nucleus | 50.0 | 51.77 |
| PGSC0003DMT400041655 | Potato | nucleus | 55.59 | 51.44 |
| Solyc11g010270.1.1 | Tomato | nucleus | 55.9 | 51.43 |
| CDY39476 | Canola | nucleus | 44.72 | 51.06 |
| CDX76923 | Canola | nucleus | 49.07 | 50.97 |
| CDX75697 | Canola | nucleus | 45.65 | 49.83 |
| CDX69357 | Canola | nucleus | 45.65 | 49.83 |
| Bra011808.1-P | Field mustard | nucleus | 45.65 | 49.83 |
| CDX90376 | Canola | nucleus | 44.1 | 49.82 |
| AT4G40060.1 | Thale cress | nucleus | 45.34 | 49.66 |
| Bra010642.1-P | Field mustard | nucleus | 43.79 | 49.3 |
| CDX99719 | Canola | nucleus | 28.57 | 47.18 |
| CDY69618 | Canola | nucleus | 44.41 | 46.89 |
| CDY33967 | Canola | nucleus | 45.03 | 46.77 |
| Bra024377.1-P | Field mustard | nucleus | 44.1 | 46.56 |
| Bra031866.1-P | Field mustard | nucleus | 44.72 | 46.45 |
| CDY67332 | Canola | nucleus | 43.79 | 46.23 |
| CDY37819 | Canola | nucleus | 44.41 | 46.13 |
| AT5G65310.1 | Thale cress | nucleus | 44.41 | 45.83 |
| KRG99129 | Soybean | nucleus | 28.57 | 32.97 |
| KRH45876 | Soybean | nucleus | 28.57 | 32.86 |
| KRH74821 | Soybean | nucleus | 28.57 | 31.62 |
| KRH20007 | Soybean | nucleus | 21.43 | 31.22 |
| KRG93515 | Soybean | nucleus | 28.26 | 31.16 |
| KRH45836 | Soybean | nucleus | 30.75 | 30.94 |
| KRH67812 | Soybean | nucleus | 22.36 | 30.9 |
| KRH69308 | Soybean | nucleus | 28.26 | 30.85 |
| KRG96107 | Soybean | nucleus | 20.5 | 30.84 |
| KRH40114 | Soybean | nucleus | 25.78 | 30.74 |
| KRH54501 | Soybean | nucleus, plastid | 30.75 | 30.37 |
| KRG93337 | Soybean | nucleus | 25.16 | 30.34 |
| KRH01157 | Soybean | nucleus | 25.16 | 30.22 |
| KRH32628 | Soybean | nucleus | 21.12 | 30.22 |
| KRH56963 | Soybean | nucleus, plastid | 31.06 | 30.21 |
| KRH47840 | Soybean | nucleus | 22.05 | 29.83 |
| KRH18490 | Soybean | nucleus | 26.71 | 29.55 |
| KRH03417 | Soybean | nucleus, plastid | 30.12 | 29.48 |
| KRH20316 | Soybean | nucleus | 26.09 | 29.47 |
| KRG99070 | Soybean | nucleus | 15.53 | 29.07 |
| KRH26193 | Soybean | nucleus | 17.39 | 29.02 |
| KRG99178 | Soybean | nucleus | 29.19 | 29.01 |
| KRH69374 | Soybean | nucleus | 31.06 | 28.99 |
| KRH06407 | Soybean | nucleus | 22.05 | 28.98 |
| KRH74760 | Soybean | nucleus | 30.75 | 28.7 |
| KRH55168 | Soybean | nucleus | 17.39 | 28.0 |
| KRH63409 | Soybean | nucleus, plastid | 21.74 | 26.32 |
| KRH64347 | Soybean | nucleus | 19.57 | 25.71 |
| KRH53589 | Soybean | nucleus | 19.57 | 25.1 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100777924 | MapMan:15.5.3.1 | EMBL:ACUP02010800 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G014900 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | UniProt:I1MYP2 | InterPro:IPR001356 | EnsemblPlants:KRG97544 | ProteinID:KRG97544 |
| ProteinID:KRG97544.1 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF196 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0001B37777 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:1050631..1053407
Molecular Weight (calculated)
36685.1 Da
IEP (calculated)
4.548
GRAVY (calculated)
-0.958
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRLSSSDSS SALMTICPST EEHSPRNSQH MYGREFQSML DGLDEEGCVE EPGYQSEKKR RLSVDQVKAL EKNFEVENKL EPERKVKLAQ ELGLQPRQVA
101: VWFQNRRARW KTKQLERDYG VLKANYDALK LNFDTLDQDN EALRKQVKEL KSRLLQEENT GGSGVSVKEE IITRPADSED KTMEQSKSDP SSETSNINPS
201: SESEEDHLNY ECFNNNDDCV GGTAASLLQV DFKDGSSDSD GSSAILNEDN MYSPLKFNNC SISTSPSSSS MMNCFQFQKP YHHHAQYVKM EEHNFLSADE
301: ACNFFSDEQA PTLQWYCPEQ WS
101: VWFQNRRARW KTKQLERDYG VLKANYDALK LNFDTLDQDN EALRKQVKEL KSRLLQEENT GGSGVSVKEE IITRPADSED KTMEQSKSDP SSETSNINPS
201: SESEEDHLNY ECFNNNDDCV GGTAASLLQV DFKDGSSDSD GSSAILNEDN MYSPLKFNNC SISTSPSSSS MMNCFQFQKP YHHHAQYVKM EEHNFLSADE
301: ACNFFSDEQA PTLQWYCPEQ WS
001: MMKRLSSSDS VGGLISLCPT TSTDEQSPRR YGGREFQSML EGYEEEEEAI VEERGHVGLS EKKRRLSINQ VKALEKNFEL ENKLEPERKV KLAQELGLQP
101: RQVAVWFQNR RARWKTKQLE KDYGVLKTQY DSLRHNFDSL RRDNESLLQE ISKLKTKLNG GGGEEEEEEN NAAVTTESDI SVKEEEVSLP EKITEAPSSP
201: PQFLEHSDGL NYRSFTDLRD LLPLKAAASS FAAAAGSSDS SDSSALLNEE SSSNVTVAAP VTVPGGNFFQ FVKMEQTEDH EDFLSGEEAC EFFSDEQPPS
301: LHWYSTVDHW N
101: RQVAVWFQNR RARWKTKQLE KDYGVLKTQY DSLRHNFDSL RRDNESLLQE ISKLKTKLNG GGGEEEEEEN NAAVTTESDI SVKEEEVSLP EKITEAPSSP
201: PQFLEHSDGL NYRSFTDLRD LLPLKAAASS FAAAAGSSDS SDSSALLNEE SSSNVTVAAP VTVPGGNFFQ FVKMEQTEDH EDFLSGEEAC EFFSDEQPPS
301: LHWYSTVDHW N
Arabidopsis Description
ATHB-6Homeobox-leucine zipper protein ATHB-6 [Source:UniProtKB/Swiss-Prot;Acc:P46668]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.