Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48942 | Canola | nucleus | 46.15 | 88.89 |
| Bra031866.1-P | Field mustard | nucleus | 81.73 | 82.26 |
| CDY37819 | Canola | nucleus | 81.73 | 82.26 |
| CDY33967 | Canola | nucleus | 79.81 | 80.32 |
| CDY69618 | Canola | nucleus | 77.88 | 79.67 |
| Bra024377.1-P | Field mustard | nucleus | 77.56 | 79.34 |
| CDY67332 | Canola | nucleus | 76.92 | 78.69 |
| KRH31331 | Soybean | nucleus | 46.79 | 46.5 |
| Solyc05g051460.2.1 | Tomato | nucleus | 46.47 | 46.33 |
| KRH43132 | Soybean | nucleus | 46.15 | 46.15 |
| KRH59287 | Soybean | nucleus | 45.19 | 45.93 |
| AT4G40060.1 | Thale cress | nucleus | 43.27 | 45.92 |
| AT2G22430.1 | Thale cress | nucleus | 45.19 | 45.34 |
| PGSC0003DMT400043251 | Potato | nucleus | 46.79 | 44.92 |
| KRG97544 | Soybean | nucleus | 45.83 | 44.41 |
| VIT_07s0191g00180.t01 | Wine grape | nucleus | 47.44 | 44.18 |
| Solyc11g010270.1.1 | Tomato | nucleus | 45.83 | 40.86 |
| PGSC0003DMT400041655 | Potato | nucleus | 45.51 | 40.8 |
| AT3G01470.1 | Thale cress | nucleus | 27.24 | 31.25 |
| AT2G36610.1 | Thale cress | nucleus | 18.27 | 30.81 |
| AT5G53980.1 | Thale cress | nucleus | 15.06 | 30.13 |
| AT1G69780.1 | Thale cress | nucleus | 28.21 | 29.93 |
| AT1G26960.1 | Thale cress | nucleus | 23.08 | 28.24 |
| AT3G01220.1 | Thale cress | nucleus | 25.32 | 27.62 |
| AT3G61890.1 | Thale cress | nucleus | 19.23 | 25.53 |
| AT5G03790.1 | Thale cress | nucleus | 18.91 | 25.11 |
| AT5G15150.1 | Thale cress | nucleus | 24.68 | 24.52 |
| AT2G46680.1 | Thale cress | nucleus | 19.23 | 23.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:836656 | ProteinID:AED98037.1 | EMBL:AF325054 | ArrayExpress:AT5G65310 |
| EnsemblPlantsGene:AT5G65310 | RefSeq:AT5G65310 | TAIR:AT5G65310 | RefSeq:AT5G65310-TAIR-G | EnsemblPlants:AT5G65310.1 | TAIR:AT5G65310.1 |
| Symbol:ATHB5 | EMBL:AY074293 | EMBL:AY091340 | Unigene:At.19698 | ProteinID:BAB11553.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0042803 | GO:GO:0043565 |
| GO:GO:0045893 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | RefSeq:NP_201334.1 | UniProt:P46667 | PFAM:PF00046 | PFAM:PF02183 | PO:PO:0000003 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003000 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF196 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0000000A85 | EMBL:X67033 |
| SEG:seg | : | : | : | : | : |
Description
ATHB-5Homeobox-leucine zipper protein ATHB-5 [Source:UniProtKB/Swiss-Prot;Acc:P46667]
Coordinates
chr5:-:26101818..26104614
Molecular Weight (calculated)
34792.4 Da
IEP (calculated)
4.754
GRAVY (calculated)
-0.707
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSRGSSDS LSGFLPIRHS TTDKQISPRP TTTGFLYSGA GDYSQMFDAL EDDGSLEDLG GVGHASSTAA EKKRRLGVEQ VKALEKNFEI DNKLEPERKV
101: KLAQELGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEENG ALKAVEANQS VMANNEVLEL
201: SHRSPSPPPH IPTDAPTSEL AFEMFSIFPR TENFRDDPAD SSDSSAVLNE EYSPNTVEAA GAVAATTVEM STMGCFSQFV KMEEHEDLFS GEEACKLFAD
301: NEQWYCSDQW NS
101: KLAQELGLQP RQVAIWFQNR RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEENG ALKAVEANQS VMANNEVLEL
201: SHRSPSPPPH IPTDAPTSEL AFEMFSIFPR TENFRDDPAD SSDSSAVLNE EYSPNTVEAA GAVAATTVEM STMGCFSQFV KMEEHEDLFS GEEACKLFAD
301: NEQWYCSDQW NS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.