Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41547 | Canola | nucleus | 81.78 | 83.07 |
| CDX80037 | Canola | nucleus | 79.46 | 80.71 |
| Bra004516.1-P | Field mustard | nucleus | 79.46 | 80.71 |
| Bra039265.1-P | Field mustard | nucleus | 68.22 | 76.86 |
| CDY27308 | Canola | nucleus | 67.44 | 75.98 |
| AT3G61890.1 | Thale cress | nucleus | 60.08 | 65.96 |
| KRH06407 | Soybean | nucleus | 49.22 | 51.84 |
| VIT_15s0048g02870.t01 | Wine grape | nucleus | 48.06 | 51.03 |
| KRH47840 | Soybean | nucleus | 46.9 | 50.84 |
| Solyc01g096320.2.1 | Tomato | nucleus | 45.74 | 49.37 |
| PGSC0003DMT400000694 | Potato | nucleus | 47.29 | 48.41 |
| GSMUA_Achr1P16280_001 | Banana | nucleus | 31.01 | 36.36 |
| EER99231 | Sorghum | nucleus | 33.72 | 35.8 |
| Zm00001d021268_P001 | Maize | nucleus | 32.56 | 35.15 |
| Os09t0528200-01 | Rice | nucleus | 33.33 | 34.54 |
| TraesCS5B01G317400.1 | Wheat | nucleus | 32.95 | 34.14 |
| HORVU5Hr1G081090.1 | Barley | nucleus | 32.95 | 34.0 |
| TraesCS5D01G323100.2 | Wheat | nucleus | 32.56 | 33.73 |
| TraesCS5A01G316800.1 | Wheat | nucleus | 32.56 | 33.73 |
| Zm00001d006195_P001 | Maize | nucleus | 30.62 | 32.38 |
| TraesCS2D01G387300.1 | Wheat | nucleus | 29.84 | 31.69 |
| TraesCS6A01G240400.1 | Wheat | nucleus | 27.13 | 31.67 |
| TraesCS6D01G222600.1 | Wheat | nucleus | 26.74 | 30.67 |
| Os04t0541700-02 | Rice | nucleus | 32.56 | 30.43 |
| Zm00001d017422_P001 | Maize | nucleus | 27.52 | 30.21 |
| EES05814 | Sorghum | nucleus | 29.07 | 30.0 |
| GSMUA_Achr1P18670_001 | Banana | nucleus | 33.72 | 30.0 |
| TraesCS2B01G407600.1 | Wheat | nucleus | 30.23 | 30.0 |
| HORVU2Hr1G092710.2 | Barley | nucleus | 30.62 | 29.7 |
| TraesCS6B01G284300.1 | Wheat | nucleus | 25.58 | 29.2 |
| Zm00001d002799_P001 | Maize | nucleus | 29.46 | 29.12 |
| TraesCS2A01G389400.1 | Wheat | nucleus | 29.84 | 29.06 |
| Zm00001d025964_P001 | Maize | nucleus | 29.84 | 28.73 |
| EES11198 | Sorghum | nucleus | 29.46 | 28.15 |
| Os02t0649300-01 | Rice | nucleus | 27.13 | 26.82 |
| AT2G36610.1 | Thale cress | nucleus | 18.22 | 25.41 |
| AT3G01470.1 | Thale cress | nucleus | 24.81 | 23.53 |
| AT5G53980.1 | Thale cress | nucleus | 13.95 | 23.08 |
| AT5G03790.1 | Thale cress | nucleus | 20.54 | 22.55 |
| AT2G22430.1 | Thale cress | nucleus | 26.36 | 21.86 |
| AT4G40060.1 | Thale cress | nucleus | 24.81 | 21.77 |
| HORVU6Hr1G061390.1 | Barley | nucleus | 25.97 | 21.07 |
| AT1G26960.1 | Thale cress | nucleus | 20.54 | 20.78 |
| AT1G69780.1 | Thale cress | nucleus | 23.26 | 20.41 |
| AT5G65310.1 | Thale cress | nucleus | 23.26 | 19.23 |
| AT3G01220.1 | Thale cress | nucleus | 21.32 | 19.23 |
| AT5G15150.1 | Thale cress | nucleus | 22.87 | 18.79 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:819280 | ProteinID:AAC69925.1 | ProteinID:AEC10739.1 | ArrayExpress:AT2G46680 |
| EnsemblPlantsGene:AT2G46680 | RefSeq:AT2G46680 | TAIR:AT2G46680 | RefSeq:AT2G46680-TAIR-G | EnsemblPlants:AT2G46680.1 | TAIR:AT2G46680.1 |
| Symbol:ATHB-7 | EMBL:AY045826 | EMBL:AY091364 | Unigene:At.136 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | InterPro:HTH_motif |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | RefSeq:NP_182191.1 |
| UniProt:P46897 | PFAM:PF00046 | PFAM:PF02183 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF122 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0000126233 | EMBL:X67032 | SEG:seg | : |
Description
ATHB-7Homeobox-leucine zipper protein ATHB-7 [Source:UniProtKB/Swiss-Prot;Acc:P46897]
Coordinates
chr2:-:19165274..19166967
Molecular Weight (calculated)
30512.4 Da
IEP (calculated)
5.485
GRAVY (calculated)
-1.300
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEGGEYSPA MMSAEPFLTM KKMKKSNHNK NNQRRFSDEQ IKSLEMMFES ETRLEPRKKV QLARELGLQP RQVAIWFQNK RARWKSKQLE TEYNILRQNY
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
101: DNLASQFESL KKEKQALVSE LQRLKEATQK KTQEEERQCS GDQAVVALSS THHESENEEN RRRKPEEVRP EMEMKDDKGH HGVMCDHHDY EDDDNGYSNN
201: IKREYFGGFE EEPDHLMNIV EPADSCLTSS DDWRGFKSDT TTLLDQSSNN YPWRDFWS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.