Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006285.1-P | Field mustard | nucleus | 83.44 | 92.58 |
| Bra023506.1-P | Field mustard | nucleus | 85.03 | 92.39 |
| CDX85054 | Canola | nucleus | 90.13 | 92.18 |
| Bra008717.1-P | Field mustard | nucleus | 84.39 | 92.01 |
| CDX69546 | Canola | nucleus | 90.45 | 91.91 |
| CDX70596 | Canola | nucleus | 87.9 | 90.79 |
| CDX78614 | Canola | nucleus | 86.94 | 90.7 |
| CDY70306 | Canola | nucleus | 75.8 | 81.51 |
| AT3G01220.1 | Thale cress | nucleus | 65.29 | 71.68 |
| KRH40114 | Soybean | nucleus | 46.82 | 54.44 |
| KRG93515 | Soybean | nucleus | 50.0 | 53.77 |
| KRH18490 | Soybean | nucleus | 49.04 | 52.92 |
| KRH01157 | Soybean | nucleus | 44.9 | 52.61 |
| PGSC0003DMT400003586 | Potato | nucleus | 36.31 | 47.7 |
| PGSC0003DMT400017751 | Potato | nucleus | 33.44 | 46.67 |
| Solyc02g067410.1.1 | Tomato | nucleus | 38.53 | 46.01 |
| AT1G69780.1 | Thale cress | nucleus | 41.72 | 44.56 |
| AT1G26960.1 | Thale cress | nucleus | 35.35 | 43.53 |
| Solyc02g087840.2.1 | Tomato | nucleus | 42.04 | 42.72 |
| AT2G36610.1 | Thale cress | nucleus | 19.11 | 32.43 |
| AT3G01470.1 | Thale cress | nucleus | 27.71 | 31.99 |
| AT5G53980.1 | Thale cress | nucleus | 14.01 | 28.21 |
| AT2G22430.1 | Thale cress | nucleus | 26.75 | 27.01 |
| AT4G40060.1 | Thale cress | nucleus | 25.16 | 26.87 |
| AT5G03790.1 | Thale cress | nucleus | 19.43 | 25.96 |
| AT5G65310.1 | Thale cress | nucleus | 24.52 | 24.68 |
| AT3G61890.1 | Thale cress | nucleus | 17.52 | 23.4 |
| AT2G46680.1 | Thale cress | nucleus | 18.79 | 22.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:831367 | ProteinID:AED92122.1 | EMBL:AK229364 | ArrayExpress:AT5G15150 |
| EnsemblPlantsGene:AT5G15150 | RefSeq:AT5G15150 | TAIR:AT5G15150 | RefSeq:AT5G15150-TAIR-G | EnsemblPlants:AT5G15150.1 | TAIR:AT5G15150.1 |
| Symbol:ATHB-3 | Unigene:At.49022 | UniProt:B5RID5 | EMBL:BT044059 | ProteinID:CAB89325.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | RefSeq:NP_568309.2 |
| PFAM:PF00046 | PFAM:PF02183 | PO:PO:0000037 | PO:PO:0000223 | PO:PO:0000258 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025257 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF264 |
| UniProt:Q00466 | SMART:SM00389 | SUPFAM:SSF46689 | EMBL:U09340 | UniParc:UPI0000196D3F | EMBL:X62644 |
| SEG:seg | : | : | : | : | : |
Description
HAT7Homeobox-leucine zipper protein HAT7 [Source:UniProtKB/Swiss-Prot;Acc:Q00466]
Coordinates
chr5:-:4913699..4915976
Molecular Weight (calculated)
36284.1 Da
IEP (calculated)
6.867
GRAVY (calculated)
-1.065
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MYMYEEERNN INNNQEGLRL EMAFPQHGFM FQQLHEDNAH HLPSPTSLPS CPPHLFYGGG GNYMMNRSMS FTGVSDHHHL TQKSPTTTNN MNDQDQVGEE
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.