Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g087840.2.1 | Tomato | nucleus | 94.56 | 73.14 |
| PGSC0003DMT400017751 | Potato | nucleus | 61.92 | 65.78 |
| CDY69290 | Canola | nucleus | 45.61 | 43.6 |
| PGSC0003DMT400002259 | Potato | nucleus | 42.68 | 43.4 |
| KRH40114 | Soybean | nucleus | 48.54 | 42.96 |
| KRH18490 | Soybean | nucleus | 52.3 | 42.96 |
| KRH01157 | Soybean | nucleus | 48.12 | 42.91 |
| KRG93515 | Soybean | nucleus | 52.3 | 42.81 |
| PGSC0003DMT400065805 | Potato | nucleus | 53.56 | 41.83 |
| CDY69034 | Canola | nucleus | 46.03 | 41.04 |
| Bra039135.1-P | Field mustard | nucleus | 45.61 | 40.07 |
| Bra008717.1-P | Field mustard | nucleus | 48.12 | 39.93 |
| Bra006285.1-P | Field mustard | nucleus | 46.86 | 39.58 |
| Bra023506.1-P | Field mustard | nucleus | 47.7 | 39.45 |
| CDY70306 | Canola | nucleus | 47.7 | 39.04 |
| AT3G01220.1 | Thale cress | nucleus | 45.19 | 37.76 |
| CDX85054 | Canola | nucleus | 48.12 | 37.46 |
| CDX69546 | Canola | nucleus | 48.12 | 37.22 |
| CDX78614 | Canola | nucleus | 46.86 | 37.21 |
| CDX70596 | Canola | nucleus | 46.44 | 36.51 |
| CDY28696 | Canola | nucleus | 40.17 | 36.36 |
| AT5G15150.1 | Thale cress | nucleus | 47.7 | 36.31 |
| PGSC0003DMT400081296 | Potato | nucleus | 20.5 | 27.37 |
| PGSC0003DMT400032390 | Potato | nucleus | 20.08 | 27.12 |
| PGSC0003DMT400045471 | Potato | nucleus | 33.89 | 26.91 |
| PGSC0003DMT400007376 | Potato | nucleus | 32.64 | 26.35 |
| PGSC0003DMT400006949 | Potato | nucleus | 26.36 | 25.93 |
| PGSC0003DMT400013968 | Potato | nucleus | 23.85 | 25.33 |
| PGSC0003DMT400001322 | Potato | nucleus | 29.29 | 24.56 |
| PGSC0003DMT400047622 | Potato | nucleus | 21.76 | 24.3 |
| PGSC0003DMT400000694 | Potato | nucleus | 25.52 | 24.21 |
| PGSC0003DMT400043251 | Potato | nucleus | 32.22 | 23.69 |
| PGSC0003DMT400054818 | Potato | nucleus | 20.92 | 23.58 |
| PGSC0003DMT400079230 | Potato | nucleus | 28.45 | 23.29 |
| PGSC0003DMT400041655 | Potato | nucleus | 33.47 | 22.99 |
| PGSC0003DMT400065207 | Potato | nucleus | 31.38 | 22.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | UniProt:M0ZLY8 | PFAM:PF00046 | PFAM:PF02183 | EnsemblPlantsGene:PGSC0003DMG400001417 | PGSC:PGSC0003DMG400001417 |
| EnsemblPlants:PGSC0003DMT400003586 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000294E7A9 | SEG:seg | : | : |
Description
DNA-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001417]
Coordinates
chr2:+:46344084..46345608
Molecular Weight (calculated)
27265.7 Da
IEP (calculated)
6.632
GRAVY (calculated)
-0.990
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFSGVEDNE MSDDDGSSQL LGEKKRRLNM EQVKALERSF EVANKLDPER KIQLARALGL QPRQIAIWFQ NRRARWKTKQ LEKDYEMLKR HFDSLKTDND
101: ALKAQNKELH SELQLLSVKK RESSGGGAIM FNLNKENEGC WSNNGSDDNN NNSIDVNLGT RTSSGDSPFY SKNVFPSGPG PVPLAKFLQS SSTPPDHLNH
201: CNKNNNIDPT VQHEGFCNMF TPVDDHTNFW PWPEQQHFN
101: ALKAQNKELH SELQLLSVKK RESSGGGAIM FNLNKENEGC WSNNGSDDNN NNSIDVNLGT RTSSGDSPFY SKNVFPSGPG PVPLAKFLQS SSTPPDHLNH
201: CNKNNNIDPT VQHEGFCNMF TPVDDHTNFW PWPEQQHFN
001: MYMYEEERNN INNNQEGLRL EMAFPQHGFM FQQLHEDNAH HLPSPTSLPS CPPHLFYGGG GNYMMNRSMS FTGVSDHHHL TQKSPTTTNN MNDQDQVGEE
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
Arabidopsis Description
HAT7Homeobox-leucine zipper protein HAT7 [Source:UniProtKB/Swiss-Prot;Acc:Q00466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.