Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006285.1-P | Field mustard | nucleus | 92.69 | 98.59 |
| CDX70596 | Canola | nucleus | 96.68 | 95.72 |
| CDX85054 | Canola | nucleus | 89.04 | 87.3 |
| AT5G15150.1 | Thale cress | nucleus | 90.7 | 86.94 |
| CDX69546 | Canola | nucleus | 88.7 | 86.41 |
| CDY70306 | Canola | nucleus | 74.09 | 76.37 |
| CDY69034 | Canola | nucleus | 61.79 | 69.4 |
| CDY69290 | Canola | nucleus | 56.81 | 68.4 |
| CDY28696 | Canola | nucleus | 56.81 | 64.77 |
| KRH40114 | Soybean | nucleus | 48.17 | 53.7 |
| KRG93515 | Soybean | nucleus | 51.16 | 52.74 |
| KRH18490 | Soybean | nucleus | 50.17 | 51.89 |
| KRH01157 | Soybean | nucleus | 45.18 | 50.75 |
| PGSC0003DMT400017751 | Potato | nucleus | 35.55 | 47.56 |
| PGSC0003DMT400003586 | Potato | nucleus | 37.21 | 46.86 |
| Solyc02g067410.1.1 | Tomato | nucleus | 40.53 | 46.39 |
| CDY52767 | Canola | nucleus | 38.87 | 46.06 |
| CDY46427 | Canola | nucleus | 38.54 | 45.67 |
| CDY38759 | Canola | nucleus | 41.86 | 44.37 |
| CDY44091 | Canola | nucleus | 38.54 | 43.61 |
| CDY11659 | Canola | nucleus | 41.53 | 43.4 |
| CDY23547 | Canola | nucleus | 40.2 | 43.21 |
| CDY48942 | Canola | nucleus | 22.92 | 42.59 |
| CDY48391 | Canola | nucleus | 35.55 | 42.46 |
| Solyc02g087840.2.1 | Tomato | nucleus | 43.19 | 42.07 |
| CDY70870 | Canola | nucleus | 41.2 | 41.2 |
| CDX67451 | Canola | nucleus | 24.25 | 41.01 |
| CDY11680 | Canola | nucleus | 24.25 | 41.01 |
| CDX99719 | Canola | nucleus | 20.93 | 32.31 |
| CDY33168 | Canola | nucleus | 19.93 | 31.75 |
| CDX75029 | Canola | nucleus | 19.6 | 31.55 |
| CDY69536 | Canola | nucleus | 16.28 | 31.41 |
| CDY28803 | Canola | nucleus | 16.28 | 31.41 |
| CDY37519 | Canola | nucleus | 25.91 | 30.0 |
| CDY49056 | Canola | nucleus | 25.91 | 29.66 |
| CDY28673 | Canola | nucleus | 26.58 | 29.41 |
| CDY25596 | Canola | nucleus | 25.91 | 29.32 |
| CDX80887 | Canola | nucleus | 20.6 | 28.44 |
| CDY39476 | Canola | nucleus | 26.58 | 28.37 |
| CDY11269 | Canola | nucleus | 20.27 | 27.98 |
| CDX69357 | Canola | nucleus | 27.24 | 27.8 |
| CDX90376 | Canola | nucleus | 26.25 | 27.72 |
| CDX75697 | Canola | nucleus | 26.91 | 27.46 |
| CDY25597 | Canola | nucleus | 26.91 | 27.09 |
| CDX89467 | Canola | nucleus | 26.91 | 27.0 |
| CDY71047 | Canola | nucleus | 20.6 | 26.96 |
| CDX76923 | Canola | nucleus | 27.57 | 26.77 |
| CDY10356 | Canola | nucleus | 20.27 | 26.52 |
| CDX70284 | Canola | nucleus | 20.27 | 26.52 |
| CDY04896 | Canola | nucleus | 19.93 | 26.43 |
| CDY71532 | Canola | nucleus | 19.93 | 26.32 |
| CDY13761 | Canola | nucleus | 26.91 | 26.05 |
| CDY69618 | Canola | nucleus | 25.91 | 25.57 |
| CDX89136 | Canola | nucleus | 19.27 | 25.33 |
| CDY37819 | Canola | nucleus | 25.91 | 25.16 |
| CDY33967 | Canola | nucleus | 25.91 | 25.16 |
| CDX70283 | Canola | nucleus | 18.27 | 25.11 |
| CDY67332 | Canola | nucleus | 25.25 | 24.92 |
| CDY57869 | Canola | nucleus | 18.94 | 24.78 |
| CDY42007 | Canola | nucleus | 17.94 | 24.66 |
| CDX76591 | Canola | nucleus | 18.6 | 24.45 |
| CDY27308 | Canola | nucleus | 18.27 | 24.02 |
| CDX80037 | Canola | nucleus | 19.6 | 23.23 |
| CDY41547 | Canola | nucleus | 19.27 | 22.83 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078CRD7 | EnsemblPlants:CDX78614 | ProteinID:CDX78614 | ProteinID:CDX78614.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00130028001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF264 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EECECB |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g05260D
Coordinates
chrLK031815:-:1533319..1535253
Molecular Weight (calculated)
34673.4 Da
IEP (calculated)
6.701
GRAVY (calculated)
-1.031
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MYEEEKSNIV NSQEELRLEM AFPQHGFMFQ QLHEDNAHHL PSPTSLPSCP PHLFYGGGNY MMNRSMSFTG VSDHHHLTKK SPTTTNMNDQ DQVGDEDNLS
101: DDGSHMMLGE KKKRLNLEQV RALEKSFELG NKLEPERKMQ LAKALGLQPR QIAIWFQNRR ARWKTKQLER DYDSLKKQFD ALKSDNDSLQ AHNKKLHAEV
201: VALKKQDLKE SGKIKRESAE ASWSNNESTE NINNSSEGLK DLFPSTIRSV TTSTTSAHIE HQMVQDQGFC NMFNGIDETT SAGYWAWPDQ QQQHHNHHHF
301: N
101: DDGSHMMLGE KKKRLNLEQV RALEKSFELG NKLEPERKMQ LAKALGLQPR QIAIWFQNRR ARWKTKQLER DYDSLKKQFD ALKSDNDSLQ AHNKKLHAEV
201: VALKKQDLKE SGKIKRESAE ASWSNNESTE NINNSSEGLK DLFPSTIRSV TTSTTSAHIE HQMVQDQGFC NMFNGIDETT SAGYWAWPDQ QQQHHNHHHF
301: N
001: MYMYEEERNN INNNQEGLRL EMAFPQHGFM FQQLHEDNAH HLPSPTSLPS CPPHLFYGGG GNYMMNRSMS FTGVSDHHHL TQKSPTTTNN MNDQDQVGEE
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
101: DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL
201: HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW
301: PDQQQQHHNH HQFN
Arabidopsis Description
HAT7Homeobox-leucine zipper protein HAT7 [Source:UniProtKB/Swiss-Prot;Acc:Q00466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.