Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028820.1-P | Field mustard | nucleus | 97.8 | 97.8 |
| CDX80887 | Canola | nucleus | 79.3 | 82.57 |
| CDY71047 | Canola | nucleus | 82.82 | 81.74 |
| CDY11269 | Canola | nucleus | 78.41 | 81.65 |
| CDX70284 | Canola | nucleus | 81.5 | 80.43 |
| CDY10356 | Canola | nucleus | 81.5 | 80.43 |
| AT5G03790.1 | Thale cress | nucleus | 83.26 | 80.43 |
| CDX70283 | Canola | nucleus | 62.11 | 64.38 |
| CDY42007 | Canola | nucleus | 61.23 | 63.47 |
| VIT_08s0007g04200.t01 | Wine grape | nucleus | 46.7 | 48.18 |
| PGSC0003DMT400006949 | Potato | nucleus | 45.81 | 42.8 |
| Solyc09g008810.2.1 | Tomato | nucleus | 45.37 | 42.74 |
| CDX75029 | Canola | nucleus | 33.04 | 40.11 |
| CDY33168 | Canola | nucleus | 33.04 | 39.68 |
| CDY48942 | Canola | nucleus | 23.35 | 32.72 |
| CDY69536 | Canola | nucleus | 20.26 | 29.49 |
| CDY28803 | Canola | nucleus | 19.82 | 28.85 |
| CDX67451 | Canola | nucleus | 22.47 | 28.65 |
| CDY11680 | Canola | nucleus | 22.47 | 28.65 |
| CDX99719 | Canola | nucleus | 20.7 | 24.1 |
| CDY71532 | Canola | nucleus | 22.91 | 22.81 |
| CDY69290 | Canola | nucleus | 25.11 | 22.8 |
| CDX89136 | Canola | nucleus | 22.91 | 22.71 |
| CDY28673 | Canola | nucleus | 26.43 | 22.06 |
| CDX76591 | Canola | nucleus | 22.03 | 21.83 |
| CDY57869 | Canola | nucleus | 22.03 | 21.74 |
| CDY52767 | Canola | nucleus | 24.23 | 21.65 |
| CDY46427 | Canola | nucleus | 24.23 | 21.65 |
| CDY49056 | Canola | nucleus | 24.67 | 21.29 |
| CDY37519 | Canola | nucleus | 24.23 | 21.15 |
| CDY69034 | Canola | nucleus | 24.67 | 20.9 |
| CDY41547 | Canola | nucleus | 23.35 | 20.87 |
| CDY44091 | Canola | nucleus | 24.23 | 20.68 |
| CDY69618 | Canola | nucleus | 27.75 | 20.66 |
| CDX80037 | Canola | nucleus | 22.91 | 20.47 |
| CDY25596 | Canola | nucleus | 23.79 | 20.3 |
| CDY48391 | Canola | nucleus | 22.47 | 20.24 |
| CDY38759 | Canola | nucleus | 25.11 | 20.07 |
| CDY67332 | Canola | nucleus | 26.87 | 20.0 |
| CDX78614 | Canola | nucleus | 26.43 | 19.93 |
| CDY39476 | Canola | nucleus | 24.67 | 19.86 |
| CDY11659 | Canola | nucleus | 25.11 | 19.79 |
| CDX70596 | Canola | nucleus | 26.43 | 19.74 |
| CDY37819 | Canola | nucleus | 26.87 | 19.68 |
| CDY33967 | Canola | nucleus | 26.87 | 19.68 |
| CDY70306 | Canola | nucleus | 25.11 | 19.52 |
| CDX69357 | Canola | nucleus | 25.11 | 19.32 |
| CDX75697 | Canola | nucleus | 25.11 | 19.32 |
| CDY23547 | Canola | nucleus | 23.79 | 19.29 |
| CDY70870 | Canola | nucleus | 25.55 | 19.27 |
| CDY27308 | Canola | nucleus | 19.38 | 19.21 |
| CDY25597 | Canola | nucleus | 25.11 | 19.06 |
| CDY28696 | Canola | nucleus | 22.03 | 18.94 |
| CDX76923 | Canola | nucleus | 25.55 | 18.71 |
| CDX89467 | Canola | nucleus | 24.67 | 18.67 |
| CDX85054 | Canola | nucleus | 25.11 | 18.57 |
| CDX69546 | Canola | nucleus | 25.11 | 18.45 |
| CDY13761 | Canola | nucleus | 25.11 | 18.33 |
| CDX90376 | Canola | nucleus | 22.91 | 18.25 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078EUH5 | EnsemblPlants:CDY04896 | ProteinID:CDY04896 | ProteinID:CDY04896.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00119617001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF287 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI0004EF0BA8 | : | : | : | : | : |
Description
BnaAnng00780D
Coordinates
chrLK031958:+:600202..601681
Molecular Weight (calculated)
26100.0 Da
IEP (calculated)
9.616
GRAVY (calculated)
-0.733
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWSMTSNVE NVRVAFLPQP WPESSSFNSL HSFNYHPYAA GNSYTQTGPV ISVPESDKII NAYRYPSNKN EMTKKKRLTS GQLASLEQSF QGEIKLDSDR
101: KLKLSRDLGL QPRQIAVWFQ NRRARWKAKQ LEQLYDSLRQ EYDLVSREKQ MLHEEVKKLR AVLRDQGLIK KQISGGEDTT ELPSVVIAQP RMENLHTNQL
201: TGVNQIYGID QCNNPMVVAS SSWPPYP
101: KLKLSRDLGL QPRQIAVWFQ NRRARWKAKQ LEQLYDSLRQ EYDLVSREKQ MLHEEVKKLR AVLRDQGLIK KQISGGEDTT ELPSVVIAQP RMENLHTNQL
201: TGVNQIYGID QCNNPMVVAS SSWPPYP
001: MEWSTTSNVE NVRVAFMPPP WPESSSFNSL HSFNFDPYAG NSYTPGDTQT GPVISVPESE KIMNAYRFPN NNNEMIKKKR LTSGQLASLE RSFQEEIKLD
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
101: SDRKVKLSRE LGLQPRQIAV WFQNRRARWK AKQLEQLYDS LRQEYDVVSR EKQMLHDEVK KLRALLRDQG LIKKQISAGT IKVSGEEDTV EISSVVVAHP
201: RTENMNANQI TGGNQVYGQY NNPMLVASSG WPSYP
Arabidopsis Description
ATHB-51Putative homeobox-leucine zipper protein ATHB-51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.