Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039116.1-P | Field mustard | nucleus | 96.58 | 97.69 |
| CDY37519 | Canola | nucleus | 96.58 | 97.69 |
| CDY28673 | Canola | nucleus | 80.61 | 77.94 |
| AT3G01470.1 | Thale cress | nucleus | 76.05 | 73.53 |
| PGSC0003DMT400001322 | Potato | nucleus | 58.94 | 54.39 |
| Solyc02g086930.2.1 | Tomato | nucleus | 57.41 | 52.98 |
| VIT_14s0066g01440.t01 | Wine grape | nucleus | 54.37 | 52.38 |
| KRH20316 | Soybean | nucleus | 55.51 | 51.23 |
| KRG93337 | Soybean | nucleus | 51.33 | 50.56 |
| GSMUA_Achr5P05300_001 | Banana | nucleus | 34.98 | 44.66 |
| GSMUA_Achr9P14570_001 | Banana | nucleus | 43.73 | 43.73 |
| GSMUA_Achr3P06190_001 | Banana | nucleus | 43.73 | 40.64 |
| CDY48942 | Canola | nucleus | 23.95 | 38.89 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 41.83 | 38.33 |
| CDX67451 | Canola | nucleus | 25.86 | 38.2 |
| CDY11680 | Canola | nucleus | 25.86 | 38.2 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 41.06 | 38.16 |
| Zm00001d017920_P001 | Maize | nucleus | 46.77 | 37.27 |
| KXG30829 | Sorghum | nucleus | 47.53 | 36.66 |
| Zm00001d051749_P001 | Maize | nucleus | 46.39 | 35.99 |
| Os02t0729700-01 | Rice | nucleus | 46.77 | 35.86 |
| TraesCS6A01G290800.1 | Wheat | nucleus | 46.01 | 35.59 |
| TraesCS6B01G321100.1 | Wheat | nucleus | 46.01 | 35.28 |
| HORVU6Hr1G072810.7 | Barley | nucleus | 44.49 | 33.62 |
| KXG25140 | Sorghum | nucleus | 34.98 | 33.45 |
| CDY69536 | Canola | nucleus | 19.77 | 33.33 |
| Zm00001d032316_P001 | Maize | nucleus | 34.22 | 33.33 |
| Os09t0379600-00 | Rice | nucleus | 26.24 | 32.86 |
| Zm00001d050310_P001 | Maize | nucleus | 33.84 | 32.72 |
| CDY28803 | Canola | nucleus | 19.39 | 32.69 |
| TraesCS6D01G272000.1 | Wheat | nucleus | 45.63 | 32.09 |
| CDX99719 | Canola | nucleus | 22.81 | 30.77 |
| CDY69290 | Canola | nucleus | 28.52 | 30.0 |
| TraesCS5D01G205000.1 | Wheat | nucleus | 33.84 | 29.77 |
| TraesCS5B01G197700.1 | Wheat | nucleus | 33.46 | 29.43 |
| TraesCS5A01G199300.1 | Wheat | nucleus | 33.46 | 29.33 |
| CDX75697 | Canola | nucleus | 32.7 | 29.15 |
| CDX69357 | Canola | nucleus | 32.7 | 29.15 |
| CDY39476 | Canola | nucleus | 31.18 | 29.08 |
| CDY25596 | Canola | nucleus | 29.28 | 28.95 |
| Os08t0416000-01 | Rice | nucleus | 38.4 | 28.94 |
| CDY48391 | Canola | nucleus | 27.38 | 28.57 |
| CDY69034 | Canola | nucleus | 28.9 | 28.36 |
| CDX90376 | Canola | nucleus | 30.42 | 28.07 |
| Zm00001d005692_P001 | Maize | nucleus | 29.66 | 27.56 |
| CDX76591 | Canola | nucleus | 23.95 | 27.51 |
| CDY23547 | Canola | nucleus | 28.9 | 27.14 |
| CDY44091 | Canola | nucleus | 27.38 | 27.07 |
| CDY38759 | Canola | nucleus | 28.9 | 26.76 |
| CDY25597 | Canola | nucleus | 30.42 | 26.76 |
| CDX75029 | Canola | nucleus | 19.01 | 26.74 |
| CDY11659 | Canola | nucleus | 29.28 | 26.74 |
| CDX89467 | Canola | nucleus | 30.42 | 26.67 |
| CDX89136 | Canola | nucleus | 23.19 | 26.64 |
| CDY57869 | Canola | nucleus | 23.19 | 26.52 |
| CDY13761 | Canola | nucleus | 31.18 | 26.37 |
| CDY71532 | Canola | nucleus | 22.81 | 26.32 |
| CDY27308 | Canola | nucleus | 22.81 | 26.2 |
| CDY52767 | Canola | nucleus | 25.1 | 25.98 |
| CDX80037 | Canola | nucleus | 25.1 | 25.98 |
| CDY46427 | Canola | nucleus | 25.1 | 25.98 |
| CDY33168 | Canola | nucleus | 18.63 | 25.93 |
| CDX78614 | Canola | nucleus | 29.66 | 25.91 |
| CDX80887 | Canola | nucleus | 21.29 | 25.69 |
| CDY70306 | Canola | nucleus | 28.52 | 25.68 |
| HORVU5Hr1G059410.2 | Barley | nucleus | 31.94 | 25.61 |
| CDY41547 | Canola | nucleus | 24.71 | 25.59 |
| CDX76923 | Canola | nucleus | 30.04 | 25.48 |
| CDX85054 | Canola | nucleus | 29.66 | 25.41 |
| CDY28696 | Canola | nucleus | 25.48 | 25.38 |
| CDX70596 | Canola | nucleus | 29.28 | 25.33 |
| CDX69546 | Canola | nucleus | 29.66 | 25.24 |
| EER98832 | Sorghum | nucleus | 30.42 | 25.24 |
| CDY11269 | Canola | nucleus | 20.91 | 25.23 |
| CDX70283 | Canola | nucleus | 20.91 | 25.11 |
| CDY67332 | Canola | nucleus | 28.9 | 24.92 |
| CDY69618 | Canola | nucleus | 28.9 | 24.92 |
| CDY04896 | Canola | nucleus | 21.29 | 24.67 |
| CDY42007 | Canola | nucleus | 20.53 | 24.66 |
| CDY70870 | Canola | nucleus | 28.14 | 24.58 |
| CDY37819 | Canola | nucleus | 28.9 | 24.52 |
| CDY33967 | Canola | nucleus | 28.9 | 24.52 |
| CDX70284 | Canola | nucleus | 20.53 | 23.48 |
| CDY10356 | Canola | nucleus | 20.53 | 23.48 |
| CDY71047 | Canola | nucleus | 20.15 | 23.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078IGE1 | UniProt:A0A078IGE1 | EnsemblPlants:CDY49056 | ProteinID:CDY49056 |
| ProteinID:CDY49056.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00092275001 |
| InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo |
| PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF136 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EEFB92 | SEG:seg | : |
Description
BnaC05g48840DBnaC05g48840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGE1]
Coordinates
chrLK032808:-:64542..65766
Molecular Weight (calculated)
30260.1 Da
IEP (calculated)
5.591
GRAVY (calculated)
-0.809
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNKFFFNP STSHGNMFFL GNLNPVVQAG SMMNMEESSS KRRPFFCSPD DLLYDDVDVD YYDDHTPDKK RRLTHEQVHL LEKSFEKENK LEPERKTQLA
101: NKLGLQPRQV SVWFQNRRAR WKTKQLERDF NLLKSSYDQL LSNYDSILKD NHLLRSQVTS LAGKVQAKAE TAPYQVPESN QLDPVNMNRF EPAIKTEDRL
201: SSGSAVLDED APHQLRDSCD SYFPTIVPIH HSAEEHNNGS GNDTGCFADV FVQGESFGFW GWT
101: NKLGLQPRQV SVWFQNRRAR WKTKQLERDF NLLKSSYDQL LSNYDSILKD NHLLRSQVTS LAGKVQAKAE TAPYQVPESN QLDPVNMNRF EPAIKTEDRL
201: SSGSAVLDED APHQLRDSCD SYFPTIVPIH HSAEEHNNGS GNDTGCFADV FVQGESFGFW GWT
001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
Arabidopsis Description
HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.