Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003980.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY23547 | Canola | nucleus | 94.44 | 85.0 |
| CDY44091 | Canola | nucleus | 80.95 | 76.69 |
| CDY11659 | Canola | nucleus | 84.13 | 73.61 |
| AT1G69780.1 | Thale cress | nucleus | 85.71 | 73.47 |
| CDY38759 | Canola | nucleus | 82.14 | 72.89 |
| CDY70870 | Canola | nucleus | 80.95 | 67.77 |
| CDY52767 | Canola | nucleus | 57.14 | 56.69 |
| CDY46427 | Canola | nucleus | 56.75 | 56.3 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 61.9 | 54.74 |
| KRG99129 | Soybean | nucleus | 57.14 | 51.61 |
| KRH45876 | Soybean | nucleus | 56.35 | 50.71 |
| KRH74821 | Soybean | nucleus | 57.94 | 50.17 |
| Solyc05g007180.2.1 | Tomato | nucleus | 59.92 | 49.51 |
| KRH69308 | Soybean | nucleus | 57.94 | 49.49 |
| PGSC0003DMT400065805 | Potato | nucleus | 59.92 | 49.35 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 52.38 | 47.83 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 48.81 | 46.24 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 42.46 | 46.12 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 50.79 | 45.23 |
| GSMUA_Achr10P... | Banana | nucleus | 50.79 | 44.76 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 51.19 | 44.18 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 49.21 | 44.13 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 48.81 | 43.46 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 48.02 | 43.21 |
| CDY48942 | Canola | nucleus | 27.78 | 43.21 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 40.08 | 42.8 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 48.81 | 41.98 |
| KRG99070 | Soybean | nucleus | 27.38 | 40.12 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 52.38 | 39.88 |
| Zm00001d027852_P001 | Maize | nucleus | 53.17 | 38.95 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 52.38 | 38.94 |
| CDY69034 | Canola | nucleus | 41.27 | 38.81 |
| EER92780 | Sorghum | nucleus | 54.37 | 38.59 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 51.59 | 38.46 |
| CDY69290 | Canola | nucleus | 37.7 | 38.0 |
| Zm00001d048312_P001 | Maize | nucleus | 50.79 | 37.21 |
| CDX78614 | Canola | nucleus | 42.46 | 35.55 |
| CDX69546 | Canola | nucleus | 42.46 | 34.63 |
| CDX70596 | Canola | nucleus | 41.67 | 34.54 |
| CDX85054 | Canola | nucleus | 42.06 | 34.53 |
| CDY28696 | Canola | nucleus | 36.11 | 34.47 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 34.52 | 33.98 |
| CDY70306 | Canola | nucleus | 38.89 | 33.56 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 52.38 | 33.5 |
| CDX67451 | Canola | nucleus | 23.41 | 33.15 |
| CDY11680 | Canola | nucleus | 23.41 | 33.15 |
| Zm00001d014201_P001 | Maize | nucleus | 43.65 | 31.61 |
| Os10t0404900-01 | Rice | nucleus | 44.44 | 31.55 |
| EER94272 | Sorghum | nucleus | 45.24 | 31.49 |
| CDX99719 | Canola | nucleus | 23.41 | 30.26 |
| Zm00001d033005_P001 | Maize | nucleus | 43.25 | 30.03 |
| CDY33168 | Canola | nucleus | 21.83 | 29.1 |
| CDX75029 | Canola | nucleus | 21.43 | 28.88 |
| CDY37519 | Canola | nucleus | 29.37 | 28.46 |
| CDY69536 | Canola | nucleus | 17.46 | 28.21 |
| CDY28803 | Canola | nucleus | 17.46 | 28.21 |
| CDY28673 | Canola | nucleus | 29.76 | 27.57 |
| CDY49056 | Canola | nucleus | 28.57 | 27.38 |
| CDY25596 | Canola | nucleus | 28.57 | 27.07 |
| CDX69357 | Canola | nucleus | 30.56 | 26.1 |
| CDY25597 | Canola | nucleus | 30.95 | 26.09 |
| CDY69618 | Canola | nucleus | 31.35 | 25.9 |
| CDY67332 | Canola | nucleus | 31.35 | 25.9 |
| CDY39476 | Canola | nucleus | 28.97 | 25.89 |
| CDX89467 | Canola | nucleus | 30.56 | 25.67 |
| CDX76923 | Canola | nucleus | 31.35 | 25.48 |
| CDY33967 | Canola | nucleus | 31.35 | 25.48 |
| CDY37819 | Canola | nucleus | 31.35 | 25.48 |
| CDX75697 | Canola | nucleus | 29.76 | 25.42 |
| CDX90376 | Canola | nucleus | 28.57 | 25.26 |
| CDY13761 | Canola | nucleus | 30.95 | 25.08 |
| CDY71532 | Canola | nucleus | 22.62 | 25.0 |
| CDX89136 | Canola | nucleus | 21.83 | 24.02 |
| CDY11269 | Canola | nucleus | 20.24 | 23.39 |
| CDX76591 | Canola | nucleus | 21.03 | 23.14 |
| CDY57869 | Canola | nucleus | 21.03 | 23.04 |
| CDX80887 | Canola | nucleus | 19.84 | 22.94 |
| CDY27308 | Canola | nucleus | 20.63 | 22.71 |
| CDY04896 | Canola | nucleus | 20.24 | 22.47 |
| CDX70283 | Canola | nucleus | 19.05 | 21.92 |
| CDY42007 | Canola | nucleus | 19.05 | 21.92 |
| CDX70284 | Canola | nucleus | 19.84 | 21.74 |
| CDY71047 | Canola | nucleus | 19.84 | 21.74 |
| CDY10356 | Canola | nucleus | 19.84 | 21.74 |
| CDX80037 | Canola | nucleus | 21.43 | 21.26 |
| CDY41547 | Canola | nucleus | 21.03 | 20.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | GO:A0A078IED4 | UniProt:A0A078IED4 | EnsemblPlants:CDY48391 | ProteinID:CDY48391 |
| ProteinID:CDY48391.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00089400001 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002541969 | SEG:seg |
Description
BnaA07g24100DBnaA07g24100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IED4]
Coordinates
chrLK032770:-:77618..79246
Molecular Weight (calculated)
28493.6 Da
IEP (calculated)
7.047
GRAVY (calculated)
-0.852
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCNSGMSFF PSSFMIQNSY EDDHPHQTPA LAPLLPSCSM PQDLNGFASF IGKQILEEDY SDDGSQMGEK KRRLNMEQVK TLEKTFELGN KLEPERKMQL
101: ARVLGLQPRQ IAIWFQNRRA RWKTKQLEKD YDTLKLKFDA LKAENDRLQT HNEKLQAEIM GLENKEQTKS INLNKETEGS CSNKSDNISD NPRLDISRPP
201: PPSIENTITA GHPPPPQTVG RHFFPPSPAT ATTTTTTLQF FQNSSSGQSI YG
101: ARVLGLQPRQ IAIWFQNRRA RWKTKQLEKD YDTLKLKFDA LKAENDRLQT HNEKLQAEIM GLENKEQTKS INLNKETEGS CSNKSDNISD NPRLDISRPP
201: PPSIENTITA GHPPPPQTVG RHFFPPSPAT ATTTTTTLQF FQNSSSGQSI YG
001: MSCNNNGLAF FPENFSLQNH HQEEEDHPQL LQDFHGFLGK RSPMNNVQGF CNLDMNGDEE YSDDGSKMGE KKRRLNMEQL KALEKDFELG NKLESDRKLE
101: LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS
201: QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD QQQYN
101: LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS
201: QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD QQQYN
Arabidopsis Description
ATHB-23Homeobox-leucine zipper protein ATHB-23 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.