Factsheet for Os10t0404900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94272	Sorghum	nucleus	69.86	68.51
Zm00001d014201_P001	Maize	nucleus	64.79	66.09
Zm00001d033005_P001	Maize	nucleus	65.92	64.46
TraesCS4B01G287600.1	Wheat	nucleus	56.06	60.12
TraesCS4D01G286400.2	Wheat	nucleus	56.34	59.0
TraesCS4A01G016600.1	Wheat	nucleus, plastid	55.49	58.28
GSMUA_Achr1P21620_001	Banana	nucleus	44.51	56.23
Os03t0170600-01	Rice	cytosol, nucleus	10.99	55.71
GSMUA_Achr2P07420_001	Banana	nucleus	45.07	54.79
GSMUA_Achr6P10660_001	Banana	nucleus	42.54	53.36
HORVU4Hr1G075180.3	Barley	nucleus, plastid	56.9	51.27
VIT_01s0026g01950.t01	Wine grape	nucleus	41.13	51.23
GSMUA_Achr1P12270_001	Banana	nucleus	42.25	51.19
GSMUA_Achr7P11600_001	Banana	nucleus	39.15	50.36
GSMUA_Achr10P...	Banana	nucleus	40.56	50.35
KRG99129	Soybean	nucleus	38.59	49.1
GSMUA_Achr3P21430_001	Banana	nucleus	36.34	48.5
KRH74821	Soybean	nucleus	39.72	48.45
KRG99070	Soybean	nucleus	23.38	48.26
KRH45876	Soybean	nucleus	38.03	48.21
KRH69308	Soybean	nucleus	40.0	48.14
PGSC0003DMT400002259	Potato	nucleus	31.83	48.09
Solyc05g007180.2.1	Tomato	nucleus	40.85	47.54
PGSC0003DMT400065805	Potato	nucleus	40.85	47.39
VIT_14s0108g00390.t01	Wine grape	nucleus	36.9	46.29
GSMUA_Achr7P20950_001	Banana	nucleus	30.7	46.19
GSMUA_Achr6P36450_001	Banana	nucleus	30.14	46.12
CDY44091	Canola	nucleus	34.08	45.49
GSMUA_Achr4P00550_001	Banana	nucleus	35.49	45.0
CDY38759	Canola	nucleus	35.77	44.72
Bra007881.1-P	Field mustard	nucleus	35.77	44.56
CDY48391	Canola	nucleus	31.55	44.44
Bra003980.1-P	Field mustard	nucleus	31.55	44.44
Solyc01g010600.2.1	Tomato	nucleus	30.42	44.44
AT1G69780.1	Thale cress	nucleus	36.62	44.22
Bra016266.1-P	Field mustard	nucleus	35.77	44.1
CDY11659	Canola	nucleus	35.49	43.75
CDY23547	Canola	nucleus	34.08	43.21
CDY70870	Canola	nucleus	35.77	42.19
HORVU4Hr1G075170.1	Barley	nucleus	27.89	38.67
Os08t0481400-01	Rice	nucleus	25.63	33.83
Os09t0470500-01	Rice	nucleus	25.63	32.85
Os09t0379600-00	Rice	nucleus	18.31	30.95
Os03t0188900-01	Rice	nucleus	23.66	27.01
Os02t0649300-01	Rice	nucleus	19.72	26.82
Os10t0377300-01	Rice	nucleus	21.69	25.25
Os02t0729700-01	Rice	nucleus	24.23	25.07
Os04t0541700-02	Rice	nucleus	18.59	23.91
Os09t0528200-01	Rice	nucleus	16.62	23.69
Os08t0416000-01	Rice	nucleus	22.54	22.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:4348578	UniProt:A0A0P0XTW0	ProteinID:BAT10765.1	ncoils:Coil
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009744	GO:GO:0009790	GO:GO:0009791	GO:GO:0009965	GO:GO:0009987	GO:GO:0043565
GO:GO:0048826	GO:GO:0080022	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:Leu_zip_homeo	EnsemblPlantsGene:Os10g0404900	EnsemblPlants:Os10t0404900-01	PFAM:PF00046	PFAM:PF02183
PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF225	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI0001C7A49F	RefSeq:XP_015613423.1	SEG:seg	:	:

Description

HOMEOBOX GENE 23Similar to HAHB-5 (Fragment). (Os10t0404900-01)

Coordinates

chr10:+:13804909..13806731

Molecular Weight (calculated)

36850.2 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.513

Length

355 amino acids

Sequence
(BLAST)

001: MRPAMASNGA AAGAMAPFFP PNFLLQMQQP LPLHHQHLQD HAHGGHGGHH LLPPPPPSLS PFLPDLAMDA PPPPMYEASG GDGGGGGAAS EDEEDGCGGG
101: GGGGGGEKKR RLSVEQVRTL ERSFESGNKL EPERKAQLAR ALGLQPRQVA IWFQNRRARW KTKQLEKDFD ALRRQLDAAR AENDALLSLN SKLHAEIVAL
201: KGGAAAAGGG GSSCRQEAAS ELINLNVKET EASCSNRSEN SSEINLDISR PAPPPPPPPA NESPVNRGIP FYASIGRGGA GGVDIDQLLL RGGHSPSPAA
301: VTTPPPPKME LGITGNGGGA DAAAAGAGSF GGLLCGAVDE QPPFWPWADG HHHFH

Best Arabidopsis Sequence Match ( AT1G69780.1 )
(BLAST)

001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN

Arabidopsis Description

ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.