Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74821 | Soybean | nucleus | 96.61 | 97.94 |
| KRG99129 | Soybean | nucleus | 83.73 | 88.53 |
| KRH45876 | Soybean | nucleus | 83.05 | 87.5 |
| VIT_01s0026g01950.t01 | Wine grape | nucleus | 81.36 | 84.21 |
| KRG99070 | Soybean | nucleus | 46.78 | 80.23 |
| PGSC0003DMT400065805 | Potato | nucleus | 74.24 | 71.57 |
| Solyc05g007180.2.1 | Tomato | nucleus | 73.56 | 71.15 |
| VIT_14s0108g00390.t01 | Wine grape | nucleus | 63.73 | 66.43 |
| PGSC0003DMT400002259 | Potato | nucleus | 51.86 | 65.11 |
| AT1G69780.1 | Thale cress | nucleus | 64.75 | 64.97 |
| CDY44091 | Canola | nucleus | 57.97 | 64.29 |
| Bra007881.1-P | Field mustard | nucleus | 62.03 | 64.21 |
| Bra016266.1-P | Field mustard | nucleus | 62.37 | 63.89 |
| Solyc01g010600.2.1 | Tomato | nucleus | 52.54 | 63.79 |
| CDY38759 | Canola | nucleus | 61.36 | 63.73 |
| CDY11659 | Canola | nucleus | 62.03 | 63.54 |
| CDY70870 | Canola | nucleus | 62.37 | 61.13 |
| GSMUA_Achr6P36450_001 | Banana | nucleus | 47.8 | 60.78 |
| CDY23547 | Canola | nucleus | 57.63 | 60.71 |
| GSMUA_Achr4P00550_001 | Banana | nucleus | 57.29 | 60.36 |
| GSMUA_Achr1P12270_001 | Banana | nucleus | 59.32 | 59.73 |
| GSMUA_Achr1P21620_001 | Banana | nucleus | 56.61 | 59.43 |
| GSMUA_Achr7P11600_001 | Banana | nucleus | 55.59 | 59.42 |
| GSMUA_Achr7P20950_001 | Banana | nucleus | 47.46 | 59.32 |
| GSMUA_Achr2P07420_001 | Banana | nucleus | 57.97 | 58.56 |
| Bra003980.1-P | Field mustard | nucleus | 49.49 | 57.94 |
| CDY48391 | Canola | nucleus | 49.49 | 57.94 |
| GSMUA_Achr3P21430_001 | Banana | nucleus | 52.2 | 57.89 |
| GSMUA_Achr10P... | Banana | nucleus | 55.25 | 56.99 |
| GSMUA_Achr6P10660_001 | Banana | nucleus | 54.24 | 56.54 |
| KRH40114 | Soybean | nucleus | 51.53 | 56.3 |
| KRH01157 | Soybean | nucleus | 50.17 | 55.22 |
| KRH18490 | Soybean | nucleus | 53.56 | 54.3 |
| KRG93515 | Soybean | nucleus | 53.56 | 54.11 |
| TraesCS4B01G287600.1 | Wheat | nucleus | 56.61 | 50.45 |
| Zm00001d027852_P001 | Maize | nucleus | 58.31 | 50.0 |
| TraesCS4D01G286400.2 | Wheat | nucleus | 56.61 | 49.26 |
| EER92780 | Sorghum | nucleus | 58.98 | 49.01 |
| TraesCS4A01G016600.1 | Wheat | nucleus, plastid | 55.59 | 48.52 |
| Zm00001d048312_P001 | Maize | nucleus | 55.25 | 47.38 |
| HORVU4Hr1G075180.3 | Barley | nucleus, plastid | 56.95 | 42.64 |
| Os10t0404900-01 | Rice | nucleus | 48.14 | 40.0 |
| Zm00001d014201_P001 | Maize | nucleus | 45.76 | 38.79 |
| EER94272 | Sorghum | nucleus | 46.78 | 38.12 |
| HORVU4Hr1G075170.1 | Barley | nucleus | 31.86 | 36.72 |
| Zm00001d033005_P001 | Maize | nucleus | 43.73 | 35.54 |
| KRG96107 | Soybean | nucleus | 23.39 | 32.24 |
| KRH67812 | Soybean | nucleus | 23.73 | 30.04 |
| KRG93337 | Soybean | nucleus | 27.12 | 29.96 |
| KRH20316 | Soybean | nucleus | 28.47 | 29.47 |
| KRH20007 | Soybean | nucleus | 22.03 | 29.41 |
| KRH59287 | Soybean | nucleus | 30.51 | 29.32 |
| KRH43132 | Soybean | nucleus | 30.51 | 28.85 |
| KRH54501 | Soybean | nucleus, plastid | 31.86 | 28.83 |
| KRH69374 | Soybean | nucleus | 33.56 | 28.7 |
| KRH31331 | Soybean | nucleus | 30.51 | 28.66 |
| KRH32628 | Soybean | nucleus | 21.69 | 28.44 |
| KRH45836 | Soybean | nucleus | 30.85 | 28.44 |
| KRG97544 | Soybean | nucleus | 30.85 | 28.26 |
| KRH74760 | Soybean | nucleus | 32.88 | 28.12 |
| KRH56963 | Soybean | nucleus, plastid | 31.19 | 27.79 |
| KRH03417 | Soybean | nucleus, plastid | 30.85 | 27.66 |
| KRG99178 | Soybean | nucleus | 29.49 | 26.85 |
| KRH55168 | Soybean | nucleus | 17.97 | 26.5 |
| KRH47840 | Soybean | nucleus | 21.36 | 26.47 |
| KRH26193 | Soybean | nucleus | 17.29 | 26.42 |
| KRH64347 | Soybean | nucleus | 21.36 | 25.71 |
| KRH06407 | Soybean | nucleus | 20.68 | 24.9 |
| KRH53589 | Soybean | nucleus | 21.02 | 24.7 |
| KRH63409 | Soybean | nucleus, plastid | 21.69 | 24.06 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100808033 | MapMan:15.5.3.1 | EMBL:ACUP02000701 | ncoils:Coil | EnsemblPlantsGene:GLYMA_02G019100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | UniProt:I1JBM6 | InterPro:IPR001356 | EnsemblPlants:KRH69308 | ProteinID:KRH69308 |
| ProteinID:KRH69308.1 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF176 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0002337132 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:1682591..1685705
Molecular Weight (calculated)
33682.4 Da
IEP (calculated)
6.648
GRAVY (calculated)
-0.924
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MWHKTCNEMA FFPANFMLQT PHHDDHHHHQ PPPSLTSILP TCAPQEYHGG VTILGKRSMS FSSGIEHGEE ANNAEEDLSD DGSQAGEKKR RLNMEQVKTL
101: EKSFELGNKL EPERKMQLAR ALGLQPRQIA IWFQNRRARW KTKQLEKDYD VLKRQYEAVK SDNDALQAQN QKLQAEILAL KSREPTESIN LNKETEGSCS
201: NRSENSSDIK LDISRTPAID SPHSTHQQQP SRPFFPPSSV RPAGVAQLFQ TSSRPELASC QKIDQMVKEE SLSNMFCGMD DQSGFWPWLE QQHFN
101: EKSFELGNKL EPERKMQLAR ALGLQPRQIA IWFQNRRARW KTKQLEKDYD VLKRQYEAVK SDNDALQAQN QKLQAEILAL KSREPTESIN LNKETEGSCS
201: NRSENSSDIK LDISRTPAID SPHSTHQQQP SRPFFPPSSV RPAGVAQLFQ TSSRPELASC QKIDQMVKEE SLSNMFCGMD DQSGFWPWLE QQHFN
001: MSCNNGMSFF PSNFMIQTSY EDDHPHQSPS LAPLLPSCSL PQDLHGFASF LGKRSPMEGC CDLETGNNMN GEEDYSDDGS QMGEKKRRLN MEQVKTLEKN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
101: FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDTLK RQFDTLKAEN DLLQTHNQKL QAEIMGLKNR EQTESINLNK ETEGSCSNRS
201: DNSSDNLRLD ISTAPPSNDS TLTGGHPPPP QTVGRHFFPP SPATATTTTT TMQFFQNSSS GQSMVKEENS ISNMFCAMDD HSGFWPWLDQ QQYN
Arabidopsis Description
ATHB-13Homeobox-leucine zipper protein ATHB-13 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC03]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.