Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97544 | Soybean | nucleus | 90.76 | 88.51 |
| KRH43132 | Soybean | nucleus | 67.52 | 67.95 |
| KRH59287 | Soybean | nucleus | 65.61 | 67.1 |
| CDY48942 | Canola | nucleus | 30.25 | 58.64 |
| VIT_07s0191g00180.t01 | Wine grape | nucleus | 61.47 | 57.61 |
| Bra030238.1-P | Field mustard | nucleus | 49.36 | 52.19 |
| CDY25597 | Canola | nucleus | 49.68 | 52.17 |
| AT2G22430.1 | Thale cress | nucleus | 51.59 | 52.09 |
| Solyc05g051460.2.1 | Tomato | nucleus | 51.91 | 52.08 |
| CDX89467 | Canola | nucleus | 49.68 | 52.0 |
| PGSC0003DMT400043251 | Potato | nucleus | 53.5 | 51.69 |
| CDY25596 | Canola | nucleus | 43.63 | 51.5 |
| CDY39476 | Canola | nucleus | 46.18 | 51.42 |
| Solyc11g010270.1.1 | Tomato | nucleus | 56.69 | 50.86 |
| Bra038523.1-P | Field mustard | nucleus | 50.32 | 50.8 |
| CDY13761 | Canola | nucleus | 50.32 | 50.8 |
| PGSC0003DMT400041655 | Potato | nucleus | 55.73 | 50.29 |
| CDX90376 | Canola | nucleus | 45.54 | 50.18 |
| CDX76923 | Canola | nucleus | 49.04 | 49.68 |
| Bra010642.1-P | Field mustard | nucleus | 45.22 | 49.65 |
| CDX69357 | Canola | nucleus | 46.18 | 49.15 |
| CDX75697 | Canola | nucleus | 46.18 | 49.15 |
| Bra011808.1-P | Field mustard | nucleus | 46.18 | 49.15 |
| AT4G40060.1 | Thale cress | nucleus | 45.86 | 48.98 |
| CDY69618 | Canola | nucleus | 45.86 | 47.21 |
| CDX99719 | Canola | nucleus | 29.3 | 47.18 |
| Bra024377.1-P | Field mustard | nucleus | 45.54 | 46.89 |
| AT5G65310.1 | Thale cress | nucleus | 46.5 | 46.79 |
| CDY33967 | Canola | nucleus | 46.18 | 46.77 |
| CDY67332 | Canola | nucleus | 45.22 | 46.56 |
| Bra031866.1-P | Field mustard | nucleus | 45.86 | 46.45 |
| CDY37819 | Canola | nucleus | 45.86 | 46.45 |
| KRG99129 | Soybean | nucleus | 29.62 | 33.33 |
| KRH45876 | Soybean | nucleus | 29.62 | 33.21 |
| KRG93515 | Soybean | nucleus | 29.3 | 31.51 |
| KRH40114 | Soybean | nucleus | 27.07 | 31.48 |
| KRH74821 | Soybean | nucleus | 28.98 | 31.27 |
| KRH67812 | Soybean | nucleus | 22.93 | 30.9 |
| KRG96107 | Soybean | nucleus | 21.02 | 30.84 |
| KRH20007 | Soybean | nucleus | 21.66 | 30.77 |
| KRH69308 | Soybean | nucleus | 28.66 | 30.51 |
| KRH18490 | Soybean | nucleus | 28.03 | 30.24 |
| KRH01157 | Soybean | nucleus | 25.8 | 30.22 |
| KRG93337 | Soybean | nucleus | 25.48 | 29.96 |
| KRH45836 | Soybean | nucleus | 30.25 | 29.69 |
| KRH20316 | Soybean | nucleus | 26.75 | 29.47 |
| KRH32628 | Soybean | nucleus | 21.02 | 29.33 |
| KRG99070 | Soybean | nucleus | 15.92 | 29.07 |
| KRH47840 | Soybean | nucleus | 21.97 | 28.99 |
| KRH54501 | Soybean | nucleus, plastid | 29.94 | 28.83 |
| KRH56963 | Soybean | nucleus, plastid | 29.94 | 28.4 |
| KRH06407 | Soybean | nucleus | 21.97 | 28.16 |
| KRG99178 | Soybean | nucleus | 28.98 | 28.09 |
| KRH26193 | Soybean | nucleus | 17.2 | 27.98 |
| KRH03417 | Soybean | nucleus, plastid | 28.98 | 27.66 |
| KRH69374 | Soybean | nucleus | 30.25 | 27.54 |
| KRH74760 | Soybean | nucleus | 29.94 | 27.25 |
| KRH55168 | Soybean | nucleus | 17.2 | 27.0 |
| KRH64347 | Soybean | nucleus | 20.38 | 26.12 |
| KRH53589 | Soybean | nucleus | 20.38 | 25.5 |
| KRH63409 | Soybean | nucleus, plastid | 21.02 | 24.81 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100781155 | MapMan:15.5.3.1 | EMBL:ACUP02007140 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G242200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | UniProt:I1LNH7 | InterPro:IPR001356 | ProteinID:KRH31330.1 | EnsemblPlants:KRH31331 |
| ProteinID:KRH31331 | ProteinID:KRH31331.1 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF524 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI0001B376BA | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:33629979..33632762
Molecular Weight (calculated)
35764.1 Da
IEP (calculated)
4.594
GRAVY (calculated)
-0.944
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRLNSSDSS TALMTIFPSS STEEHSPRNS HHMYGREFRS MLDGLDEEGC VEEPGHQSEK KRRLSVEQVK ALEKNFEVEN KLEPERKVKL AQELGLQPRQ
101: VAVWFQNRRA RWKTKQLERD YGVLKANYDA LKLNFGTLNQ DNEALRKQIK ELKSRLLQEE NTAGSGVSVK EEEITTMPAD SEEKTMEQSK SDPPSETSNI
201: NPSSESSEED HLNYECFNNN SDDCVVGGSA AASLLQVDFM KDGSSDSDGS SAILNEDTMY LPSSMNCFQF QKPYHHAQYV KTEEHNFLSA DEACNFFSDE
301: QAPTLQWYCP EQWS
101: VAVWFQNRRA RWKTKQLERD YGVLKANYDA LKLNFGTLNQ DNEALRKQIK ELKSRLLQEE NTAGSGVSVK EEEITTMPAD SEEKTMEQSK SDPPSETSNI
201: NPSSESSEED HLNYECFNNN SDDCVVGGSA AASLLQVDFM KDGSSDSDGS SAILNEDTMY LPSSMNCFQF QKPYHHAQYV KTEEHNFLSA DEACNFFSDE
301: QAPTLQWYCP EQWS
001: MMKRLSSSDS VGGLISLCPT TSTDEQSPRR YGGREFQSML EGYEEEEEAI VEERGHVGLS EKKRRLSINQ VKALEKNFEL ENKLEPERKV KLAQELGLQP
101: RQVAVWFQNR RARWKTKQLE KDYGVLKTQY DSLRHNFDSL RRDNESLLQE ISKLKTKLNG GGGEEEEEEN NAAVTTESDI SVKEEEVSLP EKITEAPSSP
201: PQFLEHSDGL NYRSFTDLRD LLPLKAAASS FAAAAGSSDS SDSSALLNEE SSSNVTVAAP VTVPGGNFFQ FVKMEQTEDH EDFLSGEEAC EFFSDEQPPS
301: LHWYSTVDHW N
101: RQVAVWFQNR RARWKTKQLE KDYGVLKTQY DSLRHNFDSL RRDNESLLQE ISKLKTKLNG GGGEEEEEEN NAAVTTESDI SVKEEEVSLP EKITEAPSSP
201: PQFLEHSDGL NYRSFTDLRD LLPLKAAASS FAAAAGSSDS SDSSALLNEE SSSNVTVAAP VTVPGGNFFQ FVKMEQTEDH EDFLSGEEAC EFFSDEQPPS
301: LHWYSTVDHW N
Arabidopsis Description
ATHB-6Homeobox-leucine zipper protein ATHB-6 [Source:UniProtKB/Swiss-Prot;Acc:P46668]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.