CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 6
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63409	Soybean	nucleus, plastid	73.01	89.47
KRH56963	Soybean	nucleus, plastid	68.71	67.67
KRH03417	Soybean	nucleus, plastid	66.87	66.26
VIT_17s0000g05630.t01	Wine grape	nucleus	63.5	65.3
PGSC0003DMT400065207	Potato	nucleus	47.55	47.4
KRH74760	Soybean	nucleus	49.69	46.96
Solyc03g113270.2.1	Tomato	nucleus, plastid	46.01	46.44
KRH69374	Soybean	nucleus	48.47	45.8
KRH45836	Soybean	nucleus	44.48	45.31
KRG99178	Soybean	nucleus	43.56	43.83
KRG93337	Soybean	nucleus	32.82	40.07
KRH20316	Soybean	nucleus	34.05	38.95
GSMUA_Achr7P09730_001	Banana	nucleus	31.9	34.67
KRH40114	Soybean	nucleus	27.61	33.33
KRH01157	Soybean	nucleus	27.3	33.21
KRG99129	Soybean	nucleus	27.91	32.62
KRH45876	Soybean	nucleus	27.91	32.5
KRH43132	Soybean	nucleus	30.98	32.37
KRH74821	Soybean	nucleus	28.53	31.96
KRH59287	Soybean	nucleus	30.06	31.92
KRH69308	Soybean	nucleus	28.83	31.86
KRG96107	Soybean	nucleus	20.55	31.31
KRG93515	Soybean	nucleus	27.61	30.82
KRG97544	Soybean	nucleus	30.37	30.75
KRH18490	Soybean	nucleus	27.3	30.58
GSMUA_Achr10P...	Banana	nucleus	32.21	30.35
KRH20007	Soybean	nucleus	20.55	30.32
KRH31331	Soybean	nucleus	28.83	29.94
KRH32628	Soybean	nucleus	20.25	29.33
KRH67812	Soybean	nucleus	20.86	29.18
KRH55168	Soybean	nucleus	17.48	28.5
KRH06407	Soybean	nucleus	21.17	28.16
KRH47840	Soybean	nucleus	20.55	28.15
KRH26193	Soybean	nucleus	16.56	27.98
KRG99070	Soybean	nucleus	14.11	26.74
KRH53589	Soybean	nucleus	19.63	25.5
KRH64347	Soybean	nucleus	18.4	24.49

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EMBL:ACUP02003536	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G190200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	UniProt:I1KCP4	InterPro:IPR001356	EnsemblPlants:KRH54501	ProteinID:KRH54501	ProteinID:KRH54501.1
InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	PRINTS:PR00031	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF306	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0001B37041	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:16703644..16706169

Molecular Weight (calculated)

36834.2 Da

IEP (calculated)

4.445

GRAVY (calculated)

-0.820

Length

326 amino acids

Sequence
(BLAST)

001: MAAGTVFCAA ATAASNLTTT TFLHNQTPPS TSSQPPLDSL FLSASSPFLG SRSIVSFGDV QGGKGCNDSF FRPYDENGDE DMDEYFHQPE KKRRLSVEQV
101: KFLEKSFDEE NKLEPERKIW LAKELGLQPR QVAIWFQNRR ARWKTKQMEK DYDSLQASYN DLKANYDNLL REKDKLKAEV ARLTEKVLGR EKNESHLEQA
201: ETNGLQEPLH KSLVDSASEG EGSKVTFEAC KQEDISSAKS DIFDSSESPQ YTDGVHSALL ETGDSSYVFE PDRSDVSQDE EDNLSKTLLP HYIFPKLEDV
301: DYSDPPHGSC NFGIPEEDQA IWSWPY

Best Arabidopsis Sequence Match ( AT3G01470.1 )
(BLAST)

001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP

Arabidopsis Description

HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.