Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20316 | Soybean | nucleus | 95.13 | 89.12 |
| VIT_14s0066g01440.t01 | Wine grape | nucleus | 64.42 | 63.0 |
| PGSC0003DMT400001322 | Potato | nucleus | 62.92 | 58.95 |
| Solyc02g086930.2.1 | Tomato | nucleus | 62.92 | 58.95 |
| AT3G01470.1 | Thale cress | nucleus | 53.56 | 52.57 |
| Bra039116.1-P | Field mustard | nucleus | 50.94 | 52.31 |
| CDY37519 | Canola | nucleus | 50.94 | 52.31 |
| CDY49056 | Canola | nucleus | 50.56 | 51.33 |
| CDY28673 | Canola | nucleus | 50.56 | 49.63 |
| Bra040519.1-P | Field mustard | nucleus | 50.19 | 48.91 |
| GSMUA_Achr5P05300_001 | Banana | nucleus | 33.71 | 43.69 |
| GSMUA_Achr9P14570_001 | Banana | nucleus | 41.57 | 42.21 |
| GSMUA_Achr3P06190_001 | Banana | nucleus | 44.19 | 41.7 |
| GSMUA_Achr9P18360_001 | Banana | nucleus | 41.95 | 39.58 |
| GSMUA_Achr8P25940_001 | Banana | nucleus | 41.95 | 39.02 |
| Zm00001d017920_P001 | Maize | nucleus | 46.44 | 37.58 |
| KXG30829 | Sorghum | nucleus | 46.82 | 36.66 |
| Zm00001d051749_P001 | Maize | nucleus | 46.07 | 36.28 |
| Os02t0729700-01 | Rice | nucleus | 46.07 | 35.86 |
| Zm00001d050310_P001 | Maize | nucleus | 36.33 | 35.66 |
| Zm00001d032316_P001 | Maize | nucleus | 35.58 | 35.19 |
| TraesCS6A01G290800.1 | Wheat | nucleus | 44.19 | 34.71 |
| KXG25140 | Sorghum | nucleus | 35.58 | 34.55 |
| TraesCS6B01G321100.1 | Wheat | nucleus | 43.82 | 34.11 |
| KRH56963 | Soybean | nucleus, plastid | 41.95 | 33.84 |
| Os09t0379600-00 | Rice | nucleus | 26.59 | 33.81 |
| KRH03417 | Soybean | nucleus, plastid | 41.57 | 33.74 |
| HORVU6Hr1G072810.7 | Barley | nucleus | 43.45 | 33.33 |
| KRH54501 | Soybean | nucleus, plastid | 40.07 | 32.82 |
| TraesCS6D01G272000.1 | Wheat | nucleus | 43.82 | 31.28 |
| KRH45836 | Soybean | nucleus | 35.96 | 30.0 |
| KRH20007 | Soybean | nucleus | 24.72 | 29.86 |
| Os08t0416000-01 | Rice | nucleus | 38.58 | 29.51 |
| KRH32628 | Soybean | nucleus | 24.72 | 29.33 |
| KRG99178 | Soybean | nucleus | 35.21 | 29.01 |
| KRH69374 | Soybean | nucleus | 37.08 | 28.7 |
| KRG96107 | Soybean | nucleus | 22.85 | 28.5 |
| KRH55168 | Soybean | nucleus | 21.35 | 28.5 |
| KRH74760 | Soybean | nucleus | 36.7 | 28.41 |
| KRH67812 | Soybean | nucleus | 24.72 | 28.33 |
| TraesCS5D01G205000.1 | Wheat | nucleus | 31.46 | 28.09 |
| KRH26193 | Soybean | nucleus | 20.22 | 27.98 |
| KRH63409 | Soybean | nucleus, plastid | 27.72 | 27.82 |
| KRG99129 | Soybean | nucleus | 28.84 | 27.6 |
| TraesCS5B01G197700.1 | Wheat | nucleus | 30.71 | 27.42 |
| KRH43132 | Soybean | nucleus | 31.84 | 27.24 |
| KRH74821 | Soybean | nucleus | 29.59 | 27.15 |
| KRH45876 | Soybean | nucleus | 28.46 | 27.14 |
| KRH69308 | Soybean | nucleus | 29.96 | 27.12 |
| KRG93515 | Soybean | nucleus | 29.59 | 27.05 |
| TraesCS5A01G199300.1 | Wheat | nucleus | 30.34 | 27.0 |
| KRH01157 | Soybean | nucleus | 26.97 | 26.87 |
| KRH18490 | Soybean | nucleus | 29.21 | 26.8 |
| KRH40114 | Soybean | nucleus | 26.97 | 26.67 |
| Zm00001d005692_P001 | Maize | nucleus | 28.09 | 26.5 |
| KRH59287 | Soybean | nucleus | 30.34 | 26.38 |
| KRH47840 | Soybean | nucleus | 22.85 | 25.63 |
| KRH31331 | Soybean | nucleus | 29.96 | 25.48 |
| KRH64347 | Soybean | nucleus | 23.22 | 25.31 |
| KRG97544 | Soybean | nucleus | 30.34 | 25.16 |
| KRH06407 | Soybean | nucleus | 22.85 | 24.9 |
| EER98832 | Sorghum | nucleus | 29.21 | 24.61 |
| KRH53589 | Soybean | nucleus | 22.85 | 24.3 |
| HORVU5Hr1G059410.2 | Barley | nucleus | 29.59 | 24.09 |
| KRG99070 | Soybean | nucleus | 13.86 | 21.51 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | UniProt:A0A0R0EGJ9 | EMBL:ACUP02011548 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G010100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlants:KRG93337 | ProteinID:KRG93337 | ProteinID:KRG93337.1 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF136 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0006EDB573 | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:+:957825..961567
Molecular Weight (calculated)
30675.6 Da
IEP (calculated)
4.413
GRAVY (calculated)
-0.796
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFLGNTELA FRGRSIMSME EASKRRPFFT SPDELYDEEY YEKQSPEKKH RLSSEQVHLL EKSFEEENKL EPERKTQLAK KLGLQPRQVA VWFQNRRARW
101: KTKQLERDYD VLKSSYDTLL SSYDSIMKEN EKLKSEVVSL NEKLQVQAKE VPEEPLCDKK VDPIPVDEDM APIFGTRVED HLSSGSVGSA VVDEGSPQVV
201: VDSVDSYILA DNYGGCVGPV ERVQSEEEDG SDDGRSYLDV FVVSETEHQN HEEGETLGWW TNMYYVG
101: KTKQLERDYD VLKSSYDTLL SSYDSIMKEN EKLKSEVVSL NEKLQVQAKE VPEEPLCDKK VDPIPVDEDM APIFGTRVED HLSSGSVGSA VVDEGSPQVV
201: VDSVDSYILA DNYGGCVGPV ERVQSEEEDG SDDGRSYLDV FVVSETEHQN HEEGETLGWW TNMYYVG
001: MESNSFFFDP SASHGNSMFF LGNLNPVVQG GGARSMMNME ETSKRRPFFS SPEDLYDDDF YDDQLPEKKR RLTTEQVHLL EKSFETENKL EPERKTQLAK
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
101: KLGLQPRQVA VWFQNRRARW KTKQLERDYD LLKSTYDQLL SNYDSIVMDN DKLRSEVTSL TEKLQGKQET ANEPPGQVPE PNQLDPVYIN AAAIKTEDRL
201: SSGSVGSAVL DDDAPQLLDS CDSYFPSIVP IQDNSNASDH DNDRSCFADV FVPTTSPSHD HHGESLAFWG WP
Arabidopsis Description
HAT5HD-ZIP-1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.